BIOMARKERS

Molecular Biopsy of Human Tumors

- a resource for Precision Medicine *

222 related articles for article (PubMed ID: 10022981)

  • 1. Mining SNPs from EST databases.
    Picoult-Newberg L; Ideker TE; Pohl MG; Taylor SL; Donaldson MA; Nickerson DA; Boyce-Jacino M
    Genome Res; 1999 Feb; 9(2):167-74. PubMed ID: 10022981
    [TBL] [Abstract][Full Text] [Related]  

  • 2. Mining SNPs from EST sequences using filters and ensemble classifiers.
    Wang J; Zou Q; Guo MZ
    Genet Mol Res; 2010 May; 9(2):820-34. PubMed ID: 20449815
    [TBL] [Abstract][Full Text] [Related]  

  • 3. Single nucleotide polymorphism hunting in cyberspace.
    Gu Z; Hillier L; Kwok PY
    Hum Mutat; 1998; 12(4):221-5. PubMed ID: 9744471
    [TBL] [Abstract][Full Text] [Related]  

  • 4. SNP mining porcine ESTs with MAVIANT, a novel tool for SNP evaluation and annotation.
    Panitz F; Stengaard H; Hornshøj H; Gorodkin J; Hedegaard J; Cirera S; Thomsen B; Madsen LB; Høj A; Vingborg RK; Zahn B; Wang X; Wang X; Wernersson R; Jørgensen CB; Scheibye-Knudsen K; Arvin T; Lumholdt S; Sawera M; Green T; Nielsen BJ; Havgaard JH; Brunak S; Fredholm M; Bendixen C
    Bioinformatics; 2007 Jul; 23(13):i387-91. PubMed ID: 17646321
    [TBL] [Abstract][Full Text] [Related]  

  • 5. Using mtDNA sequences to estimate SNP parameters in ESTs.
    Reed KM
    Anim Biotechnol; 2008; 19(3):166-77. PubMed ID: 18607789
    [TBL] [Abstract][Full Text] [Related]  

  • 6. Mining SNPs from DNA sequence data; computational approaches to SNP discovery and analysis.
    van Oeveren J; Janssen A
    Methods Mol Biol; 2009; 578():73-91. PubMed ID: 19768587
    [TBL] [Abstract][Full Text] [Related]  

  • 7. Mining single-nucleotide polymorphisms from hexaploid wheat ESTs.
    Somers DJ; Kirkpatrick R; Moniwa M; Walsh A
    Genome; 2003 Jun; 46(3):431-7. PubMed ID: 12834059
    [TBL] [Abstract][Full Text] [Related]  

  • 8. Snipping polymorphisms from large EST collections in barley (Hordeum vulgare L.).
    Kota R; Rudd S; Facius A; Kolesov G; Thiel T; Zhang H; Stein N; Mayer K; Graner A
    Mol Genet Genomics; 2003 Oct; 270(1):24-33. PubMed ID: 12938038
    [TBL] [Abstract][Full Text] [Related]  

  • 9. High-throughput identification, database storage and analysis of SNPs in EST sequences.
    Useche FJ; Gao G; Harafey M; Rafalski A
    Genome Inform; 2001; 12():194-203. PubMed ID: 11791238
    [TBL] [Abstract][Full Text] [Related]  

  • 10. Chicken genomics resource: sequencing and annotation of 35,407 ESTs from single and multiple tissue cDNA libraries and CAP3 assembly of a chicken gene index.
    Carre W; Wang X; Porter TE; Nys Y; Tang J; Bernberg E; Morgan R; Burnside J; Aggrey SE; Simon J; Cogburn LA
    Physiol Genomics; 2006 May; 25(3):514-24. PubMed ID: 16554550
    [TBL] [Abstract][Full Text] [Related]  

  • 11. Mining single nucleotide polymorphisms from EST data of silkworm, Bombyx mori, inbred strain Dazao.
    Cheng TC; Xia QY; Qian JF; Liu C; Lin Y; Zha XF; Xiang ZH
    Insect Biochem Mol Biol; 2004 Jun; 34(6):523-30. PubMed ID: 15147754
    [TBL] [Abstract][Full Text] [Related]  

  • 12. SNP discovery and allele frequency estimation by deep sequencing of reduced representation libraries.
    Van Tassell CP; Smith TP; Matukumalli LK; Taylor JF; Schnabel RD; Lawley CT; Haudenschild CD; Moore SS; Warren WC; Sonstegard TS
    Nat Methods; 2008 Mar; 5(3):247-52. PubMed ID: 18297082
    [TBL] [Abstract][Full Text] [Related]  

  • 13. ESTs as a source for sequence polymorphism discovery in sugarcane: example of the Adh genes.
    Grivet L; Glaszmann JC; Vincentz M; da Silva F; Arruda P
    Theor Appl Genet; 2003 Jan; 106(2):190-7. PubMed ID: 12582843
    [TBL] [Abstract][Full Text] [Related]  

  • 14. Rapid genetic mapping of ESTs using SNP pyrosequencing and indel analysis.
    Ching A; Rafalski A
    Cell Mol Biol Lett; 2002; 7(2B):803-10. PubMed ID: 12378241
    [TBL] [Abstract][Full Text] [Related]  

  • 15. SNP detection exploiting multiple sources of redundancy in large EST collections improves validation rates.
    Hayes BJ; Nilsen K; Berg PR; Grindflek E; Lien S
    Bioinformatics; 2007 Jul; 23(13):1692-3. PubMed ID: 17463019
    [TBL] [Abstract][Full Text] [Related]  

  • 16. Short reads and nonmodel species: exploring the complexities of next-generation sequence assembly and SNP discovery in the absence of a reference genome.
    Everett MV; Grau ED; Seeb JE
    Mol Ecol Resour; 2011 Mar; 11 Suppl 1():93-108. PubMed ID: 21429166
    [TBL] [Abstract][Full Text] [Related]  

  • 17. Discovery and evaluation of single nucleotide polymorphisms (SNPs) for Haliotis midae: a targeted EST approach.
    Bester AE; Roodt-Wilding R; Whitaker HA
    Anim Genet; 2008 Jun; 39(3):321-4. PubMed ID: 18454808
    [TBL] [Abstract][Full Text] [Related]  

  • 18. Exploiting EST databases for the development and characterization of gene-derived SSR-markers in barley (Hordeum vulgare L.).
    Thiel T; Michalek W; Varshney RK; Graner A
    Theor Appl Genet; 2003 Feb; 106(3):411-22. PubMed ID: 12589540
    [TBL] [Abstract][Full Text] [Related]  

  • 19. Novel retinal genes discovered by mining the mouse embryonic RetinalExpress database.
    Liang S; Zhao S; Mu X; Thomas T; Klein WH
    Mol Vis; 2004 Oct; 10():773-86. PubMed ID: 15496829
    [TBL] [Abstract][Full Text] [Related]  

  • 20. Data mining: Efficiency of using sequence databases for polymorphism discovery.
    Cox D; Boillot C; Canzian F
    Hum Mutat; 2001 Feb; 17(2):141-50. PubMed ID: 11180597
    [TBL] [Abstract][Full Text] [Related]  

    [Next]    [New Search]
    of 12.