72 related articles for article (PubMed ID: 10052614)
1. The residence time of the bound water in the hydrophobic minor groove of the carbocyclic-nucleoside analogs of Dickerson-Drew dodecamers.
Maltseva TV; Altmann KH; Egli M; Chattopadhyaya J
J Biomol Struct Dyn; 1998 Dec; 16(3):569-78. PubMed ID: 10052614
[TBL] [Abstract][Full Text] [Related]
2. The solution conformation of a carbocyclic analog of the Dickerson-Drew dodecamer: comparison with its own X-ray structure and that of the NMR structure of the native counterpart.
Denisov AY; Zamaratski EV; Maltseva TV; Sandström A; Bekiroglu S; Altmann KH; Egli M; Chattopadhyaya J
J Biomol Struct Dyn; 1998 Dec; 16(3):547-68. PubMed ID: 10052613
[TBL] [Abstract][Full Text] [Related]
3. An NMR study of d(CTACTGCTTTAG).d(CTAAAGCAGTAG) showing hydration water molecules in the minor groove of a TpA step.
Leporc S; Mauffret O; El Antri S; Convert O; Lescot E; Tevanian G; Fermandjian S
J Biomol Struct Dyn; 1998 Dec; 16(3):639-49. PubMed ID: 10052620
[TBL] [Abstract][Full Text] [Related]
4. Determination of the residence time of water molecules hydrating B'- DNA and B-DNA, by one-dimensional zero-enhancement nuclear Overhauser effect spectroscopy.
Phan AT; Leroy JL; Guéron M
J Mol Biol; 1999 Feb; 286(2):505-19. PubMed ID: 9973567
[TBL] [Abstract][Full Text] [Related]
5. Structure, dynamics and hydration of the nogalamycin-d(ATGCAT)2Complex determined by NMR and molecular dynamics simulations in solution.
Williams HE; Searle MS
J Mol Biol; 1999 Jul; 290(3):699-716. PubMed ID: 10395824
[TBL] [Abstract][Full Text] [Related]
6. A single 2'-hydroxyl group converts B-DNA to A-DNA. Crystal structure of the DNA-RNA chimeric decamer duplex d(CCGGC)r(G)d(CCGG) with a novel intermolecular G-C base-paired quadruplet.
Ban C; Ramakrishnan B; Sundaralingam M
J Mol Biol; 1994 Feb; 236(1):275-85. PubMed ID: 7508984
[TBL] [Abstract][Full Text] [Related]
7. Water molecules in DNA recognition II: a molecular dynamics view of the structure and hydration of the trp operator.
Bonvin AM; Sunnerhagen M; Otting G; van Gunsteren WF
J Mol Biol; 1998 Oct; 282(4):859-73. PubMed ID: 9743632
[TBL] [Abstract][Full Text] [Related]
8. Fine tuning of electrostatics around the internucleotidic phosphate through incorporation of modified 2',4'-carbocyclic-LNAs and -ENAs leads to significant modulation of antisense properties.
Zhou C; Liu Y; Andaloussi M; Badgujar N; Plashkevych O; Chattopadhyaya J
J Org Chem; 2009 Jan; 74(1):118-34. PubMed ID: 19055352
[TBL] [Abstract][Full Text] [Related]
9. Dependence of the hydration shell structure in the minor groove of the DNA double helix on the groove width as revealed by Monte Carlo simulation.
Teplukhin AV; Poltev VI; Chuprina VP
Biopolymers; 1991 Oct; 31(12):1445-53. PubMed ID: 1816879
[TBL] [Abstract][Full Text] [Related]
10. Hydration of the RNA duplex r(CGCAAAUUUGCG)2 determined by NMR.
Conte MR; Conn GL; Brown T; Lane AN
Nucleic Acids Res; 1996 Oct; 24(19):3693-9. PubMed ID: 8871546
[TBL] [Abstract][Full Text] [Related]
11. Competitive Na(+) and Rb(+) binding in the minor groove of DNA.
Cesare Marincola F; Denisov VP; Halle B
J Am Chem Soc; 2004 Jun; 126(21):6739-50. PubMed ID: 15161302
[TBL] [Abstract][Full Text] [Related]
12. Molecular structure of the core-modified siRNA duplexes containing diastereomeric pair of [C6'(R)-OH]- versus [C6'(S)-OH]-carba-LNAs suggests a model for RNAi action.
Plashkevych O; Chattopadhyaya J
Nucleosides Nucleotides Nucleic Acids; 2011 Nov; 30(11):815-25. PubMed ID: 22060548
[TBL] [Abstract][Full Text] [Related]
13. Kinetics of DNA hydration.
Denisov VP; Carlström G; Venu K; Halle B
J Mol Biol; 1997 Apr; 268(1):118-36. PubMed ID: 9149146
[TBL] [Abstract][Full Text] [Related]
14. Solution structure of the calicheamicin gamma 1I-DNA complex.
Kumar RA; Ikemoto N; Patel DJ
J Mol Biol; 1997 Jan; 265(2):187-201. PubMed ID: 9020982
[TBL] [Abstract][Full Text] [Related]
15. Investigation of solution structure of d(GAATTTAAATTC)2 by 1H NMR, molecular dynamics, mechanics, refinement by back-calculation of the NOESY spectrum and analysis of this structure using X-ray data.
Chuprina VP; Sletten E; Fedoroff OYu
J Biomol Struct Dyn; 1993 Feb; 10(4):693-707. PubMed ID: 8466674
[TBL] [Abstract][Full Text] [Related]
16. Exploring DNA groove water dynamics through hydrogen bond lifetime and orientational relaxation.
Pal S; Maiti PK; Bagchi B
J Chem Phys; 2006 Dec; 125(23):234903. PubMed ID: 17190573
[TBL] [Abstract][Full Text] [Related]
17. Solution structure of the covalent duocarmycin A-DNA duplex complex.
Lin CH; Patel DJ
J Mol Biol; 1995 Apr; 248(1):162-79. PubMed ID: 7731041
[TBL] [Abstract][Full Text] [Related]
18. Hydration of DNA in aqueous solution: NMR evidence for a kinetic destabilization of the minor groove hydration of d-(TTAA)2 versus d-(AATT)2 segments.
Liepinsh E; Leupin W; Otting G
Nucleic Acids Res; 1994 Jun; 22(12):2249-54. PubMed ID: 8036152
[TBL] [Abstract][Full Text] [Related]
19. RNA hydration: a detailed look.
Egli M; Portmann S; Usman N
Biochemistry; 1996 Jul; 35(26):8489-94. PubMed ID: 8679609
[TBL] [Abstract][Full Text] [Related]
20. Solution conformation of the (-)-cis-anti-benzo[a]pyrenyl-dG adduct opposite dC in a DNA duplex: intercalation of the covalently attached BP ring into the helix with base displacement of the modified deoxyguanosine into the major groove.
Cosman M; Hingerty BE; Luneva N; Amin S; Geacintov NE; Broyde S; Patel DJ
Biochemistry; 1996 Jul; 35(30):9850-63. PubMed ID: 8703959
[TBL] [Abstract][Full Text] [Related]
[Next] [New Search]