These tools will no longer be maintained as of December 31, 2024. Archived website can be found here. PubMed4Hh GitHub repository can be found here. Contact NLM Customer Service if you have questions.


BIOMARKERS

Molecular Biopsy of Human Tumors

- a resource for Precision Medicine *

90 related articles for article (PubMed ID: 10211823)

  • 1. Genome analysis: Assigning protein coding regions to three-dimensional structures.
    Salamov AA; Suwa M; Orengo CA; Swindells MB
    Protein Sci; 1999 Apr; 8(4):771-7. PubMed ID: 10211823
    [TBL] [Abstract][Full Text] [Related]  

  • 2. An integrated approach to the analysis and modeling of protein sequences and structures. III. A comparative study of sequence conservation in protein structural families using multiple structural alignments.
    Yang AS; Honig B
    J Mol Biol; 2000 Aug; 301(3):691-711. PubMed ID: 10966778
    [TBL] [Abstract][Full Text] [Related]  

  • 3. Structural and functional insights into Mimivirus ORFans.
    Saini HK; Fischer D
    BMC Genomics; 2007 May; 8():115. PubMed ID: 17490476
    [TBL] [Abstract][Full Text] [Related]  

  • 4. An integrated approach to the analysis and modeling of protein sequences and structures. II. On the relationship between sequence and structural similarity for proteins that are not obviously related in sequence.
    Yang AS; Honig B
    J Mol Biol; 2000 Aug; 301(3):679-89. PubMed ID: 10966777
    [TBL] [Abstract][Full Text] [Related]  

  • 5. Fast model-based protein homology detection without alignment.
    Hochreiter S; Heusel M; Obermayer K
    Bioinformatics; 2007 Jul; 23(14):1728-36. PubMed ID: 17488755
    [TBL] [Abstract][Full Text] [Related]  

  • 6. An integrated approach to the analysis and modeling of protein sequences and structures. I. Protein structural alignment and a quantitative measure for protein structural distance.
    Yang AS; Honig B
    J Mol Biol; 2000 Aug; 301(3):665-78. PubMed ID: 10966776
    [TBL] [Abstract][Full Text] [Related]  

  • 7. Targeting novel folds for structural genomics.
    McGuffin LJ; Jones DT
    Proteins; 2002 Jul; 48(1):44-52. PubMed ID: 12012336
    [TBL] [Abstract][Full Text] [Related]  

  • 8. [A turning point in the knowledge of the structure-function-activity relations of elastin].
    Alix AJ
    J Soc Biol; 2001; 195(2):181-93. PubMed ID: 11727705
    [TBL] [Abstract][Full Text] [Related]  

  • 9. Evaluation of PSI-BLAST alignment accuracy in comparison to structural alignments.
    Friedberg I; Kaplan T; Margalit H
    Protein Sci; 2000 Nov; 9(11):2278-84. PubMed ID: 11152139
    [TBL] [Abstract][Full Text] [Related]  

  • 10. An alternative view of protein fold space.
    Shindyalov IN; Bourne PE
    Proteins; 2000 Feb; 38(3):247-60. PubMed ID: 10713986
    [TBL] [Abstract][Full Text] [Related]  

  • 11. FRalanyzer: a tool for functional analysis of fold-recognition sequence-structure alignments.
    Saini HK; Fischer D
    Nucleic Acids Res; 2007 Jul; 35(Web Server issue):W499-502. PubMed ID: 17537819
    [TBL] [Abstract][Full Text] [Related]  

  • 12. [Analysis, identification and correction of some errors of model refseqs appeared in NCBI Human Gene Database by in silico cloning and experimental verification of novel human genes].
    Zhang DL; Ji L; Li YD
    Yi Chuan Xue Bao; 2004 May; 31(5):431-43. PubMed ID: 15478601
    [TBL] [Abstract][Full Text] [Related]  

  • 13. Exploring the extremes of sequence/structure space with ensemble fold recognition in the program Phyre.
    Bennett-Lovsey RM; Herbert AD; Sternberg MJ; Kelley LA
    Proteins; 2008 Feb; 70(3):611-25. PubMed ID: 17876813
    [TBL] [Abstract][Full Text] [Related]  

  • 14. Comparison of conformational characteristics in structurally similar protein pairs.
    Flores TP; Orengo CA; Moss DS; Thornton JM
    Protein Sci; 1993 Nov; 2(11):1811-26. PubMed ID: 8268794
    [TBL] [Abstract][Full Text] [Related]  

  • 15. WindowMasker: window-based masker for sequenced genomes.
    Morgulis A; Gertz EM; Schäffer AA; Agarwala R
    Bioinformatics; 2006 Jan; 22(2):134-41. PubMed ID: 16287941
    [TBL] [Abstract][Full Text] [Related]  

  • 16. NcDNAlign: plausible multiple alignments of non-protein-coding genomic sequences.
    Rose D; Hertel J; Reiche K; Stadler PF; Hackermüller J
    Genomics; 2008 Jul; 92(1):65-74. PubMed ID: 18511233
    [TBL] [Abstract][Full Text] [Related]  

  • 17. Sigma: multiple alignment of weakly-conserved non-coding DNA sequence.
    Siddharthan R
    BMC Bioinformatics; 2006 Mar; 7():143. PubMed ID: 16542424
    [TBL] [Abstract][Full Text] [Related]  

  • 18. GenoMiner: a tool for genome-wide search of coding and non-coding conserved sequence tags.
    Castrignanò T; De Meo PD; Grillo G; Liuni S; Mignone F; Talamo IG; Pesole G
    Bioinformatics; 2006 Feb; 22(4):497-9. PubMed ID: 16267081
    [TBL] [Abstract][Full Text] [Related]  

  • 19. Structure-based evaluation of sequence comparison and fold recognition alignment accuracy.
    Domingues FS; Lackner P; Andreeva A; Sippl MJ
    J Mol Biol; 2000 Apr; 297(4):1003-13. PubMed ID: 10736233
    [TBL] [Abstract][Full Text] [Related]  

  • 20. 3D-SHOTGUN: a novel, cooperative, fold-recognition meta-predictor.
    Fischer D
    Proteins; 2003 May; 51(3):434-41. PubMed ID: 12696054
    [TBL] [Abstract][Full Text] [Related]  

    [Next]    [New Search]
    of 5.