137 related articles for article (PubMed ID: 10222407)
1. An exact solution for the segment-to-segment multiple sequence alignment problem.
Lenhof HP; Morgenstern B; Reinert K
Bioinformatics; 1999 Mar; 15(3):203-10. PubMed ID: 10222407
[TBL] [Abstract][Full Text] [Related]
2. DIALIGN 2: improvement of the segment-to-segment approach to multiple sequence alignment.
Morgenstern B
Bioinformatics; 1999 Mar; 15(3):211-8. PubMed ID: 10222408
[TBL] [Abstract][Full Text] [Related]
3. Multiple sequence alignment with arbitrary gap costs: computing an optimal solution using polyhedral combinatorics.
Althaus E; Caprara A; Lenhof HP; Reinert K
Bioinformatics; 2002; 18 Suppl 2():S4-S16. PubMed ID: 12385977
[TBL] [Abstract][Full Text] [Related]
4. The practical use of the A* algorithm for exact multiple sequence alignment.
Lermen M; Reinert K
J Comput Biol; 2000; 7(5):655-71. PubMed ID: 11153092
[TBL] [Abstract][Full Text] [Related]
5. A weighting system and algorithm for aligning many phylogenetically related sequences.
Gotoh O
Comput Appl Biosci; 1995 Oct; 11(5):543-51. PubMed ID: 8590178
[TBL] [Abstract][Full Text] [Related]
6. Improving the practical space and time efficiency of the shortest-paths approach to sum-of-pairs multiple sequence alignment.
Gupta SK; Kececioglu JD; Schäffer AA
J Comput Biol; 1995; 2(3):459-72. PubMed ID: 8521275
[TBL] [Abstract][Full Text] [Related]
7. Segment-based scores for pairwise and multiple sequence alignments.
Morgenstern B; Atchley WR; Hahn K; Dress A
Proc Int Conf Intell Syst Mol Biol; 1998; 6():115-21. PubMed ID: 9783216
[TBL] [Abstract][Full Text] [Related]
8. Solving and analyzing side-chain positioning problems using linear and integer programming.
Kingsford CL; Chazelle B; Singh M
Bioinformatics; 2005 Apr; 21(7):1028-36. PubMed ID: 15546935
[TBL] [Abstract][Full Text] [Related]
9. MUSTANG: a multiple structural alignment algorithm.
Konagurthu AS; Whisstock JC; Stuckey PJ; Lesk AM
Proteins; 2006 Aug; 64(3):559-74. PubMed ID: 16736488
[TBL] [Abstract][Full Text] [Related]
10. Multiple sequence alignment using simulated annealing.
Kim J; Pramanik S; Chung MJ
Comput Appl Biosci; 1994 Jul; 10(4):419-26. PubMed ID: 7804875
[TBL] [Abstract][Full Text] [Related]
11. Protein structure alignment by deterministic annealing.
Chen L; Zhou T; Tang Y
Bioinformatics; 2005 Jan; 21(1):51-62. PubMed ID: 15308541
[TBL] [Abstract][Full Text] [Related]
12. The tree alignment problem.
Varón A; Wheeler WC
BMC Bioinformatics; 2012 Nov; 13():293. PubMed ID: 23140486
[TBL] [Abstract][Full Text] [Related]
13. PR2ALIGN: a stand-alone software program and a web-server for protein sequence alignment using weighted biochemical properties of amino acids.
Kuznetsov IB; McDuffie M
BMC Res Notes; 2015 May; 8():187. PubMed ID: 25947299
[TBL] [Abstract][Full Text] [Related]
14. Local multiple sequence alignment using dead-end elimination.
Lukashin AV; Rosa JJ
Bioinformatics; 1999 Nov; 15(11):947-53. PubMed ID: 10743561
[TBL] [Abstract][Full Text] [Related]
15. SALSA: improved protein database searching by a new algorithm for assembly of sequence fragments into gapped alignments.
Rognes T; Seeberg E
Bioinformatics; 1998; 14(10):839-45. PubMed ID: 9927712
[TBL] [Abstract][Full Text] [Related]
16. Tsukuba BB: a branch and bound algorithm for local multiple alignment of DNA and protein sequences.
Horton P
J Comput Biol; 2001; 8(3):283-303. PubMed ID: 11535177
[TBL] [Abstract][Full Text] [Related]
17. RBT-L: a location based approach for solving the Multiple Sequence Alignment problem.
Taheri J; Zomaya AY
Int J Bioinform Res Appl; 2010; 6(1):37-57. PubMed ID: 20110208
[TBL] [Abstract][Full Text] [Related]
18. Comprehensive study on iterative algorithms of multiple sequence alignment.
Hirosawa M; Totoki Y; Hoshida M; Ishikawa M
Comput Appl Biosci; 1995 Feb; 11(1):13-8. PubMed ID: 7796270
[TBL] [Abstract][Full Text] [Related]
19. DIALIGN-T: an improved algorithm for segment-based multiple sequence alignment.
Subramanian AR; Weyer-Menkhoff J; Kaufmann M; Morgenstern B
BMC Bioinformatics; 2005 Mar; 6():66. PubMed ID: 15784139
[TBL] [Abstract][Full Text] [Related]
20. A genetic algorithm for multiple molecular sequence alignment.
Zhang C; Wong AK
Comput Appl Biosci; 1997 Dec; 13(6):565-81. PubMed ID: 9475984
[TBL] [Abstract][Full Text] [Related]
[Next] [New Search]
