BIOMARKERS

Molecular Biopsy of Human Tumors

- a resource for Precision Medicine *

177 related articles for article (PubMed ID: 10226504)

  • 1. Molecular simulation of the effects of alcohols on peptide structure.
    Dwyer DS
    Biopolymers; 1999 Jun; 49(7):635-45. PubMed ID: 10226504
    [TBL] [Abstract][Full Text] [Related]  

  • 2. Molecular dynamics simulations of peptides and proteins with a continuum electrostatic model based on screened Coulomb potentials.
    Hassan SA; Mehler EL; Zhang D; Weinstein H
    Proteins; 2003 Apr; 51(1):109-25. PubMed ID: 12596268
    [TBL] [Abstract][Full Text] [Related]  

  • 3. Molecular dynamics simulations of small peptides: dependence on dielectric model and pH.
    Daggett V; Kollman PA; Kuntz ID
    Biopolymers; 1991 Feb; 31(3):285-304. PubMed ID: 1868159
    [TBL] [Abstract][Full Text] [Related]  

  • 4. From protein denaturant to protectant: comparative molecular dynamics study of alcohol/protein interactions.
    Shao Q; Fan Y; Yang L; Gao YQ
    J Chem Phys; 2012 Mar; 136(11):115101. PubMed ID: 22443795
    [TBL] [Abstract][Full Text] [Related]  

  • 5. Effects of chain length on the aggregation of model polyglutamine peptides: molecular dynamics simulations.
    Marchut AJ; Hall CK
    Proteins; 2007 Jan; 66(1):96-109. PubMed ID: 17068817
    [TBL] [Abstract][Full Text] [Related]  

  • 6. Molecular dynamics simulations of a beta-hairpin fragment of protein G: balance between side-chain and backbone forces.
    Ma B; Nussinov R
    J Mol Biol; 2000 Mar; 296(4):1091-104. PubMed ID: 10686106
    [TBL] [Abstract][Full Text] [Related]  

  • 7. Characterization of the denaturation of human alpha-lactalbumin in urea by molecular dynamics simulations.
    Smith LJ; Jones RM; van Gunsteren WF
    Proteins; 2005 Feb; 58(2):439-49. PubMed ID: 15558602
    [TBL] [Abstract][Full Text] [Related]  

  • 8. The solvent-dependent shift of the amide I band of a fully solvated peptide as a local probe for the solvent composition in the peptide/solvent interface.
    Paschek D; Pühse M; Perez-Goicochea A; Gnanakaran S; García AE; Winter R; Geiger A
    Chemphyschem; 2008 Dec; 9(18):2742-50. PubMed ID: 19035605
    [TBL] [Abstract][Full Text] [Related]  

  • 9. Dissecting the stability of a beta-hairpin peptide that folds in water: NMR and molecular dynamics analysis of the beta-turn and beta-strand contributions to folding.
    Griffiths-Jones SR; Maynard AJ; Searle MS
    J Mol Biol; 1999 Oct; 292(5):1051-69. PubMed ID: 10512702
    [TBL] [Abstract][Full Text] [Related]  

  • 10. Monte Carlo simulations of the solution structure of simple alcohols in water-acetonitrile mixtures.
    Nagy PI; Erhardt PW
    J Phys Chem B; 2005 Mar; 109(12):5855-72. PubMed ID: 16851638
    [TBL] [Abstract][Full Text] [Related]  

  • 11. On the influence of charged side chains on the folding-unfolding equilibrium of beta-peptides: a molecular dynamics simulation study.
    Glättli A; Daura X; Bindschädler P; Jaun B; Mahajan YR; Mathad RI; Rueping M; Seebach D; van Gunsteren WF
    Chemistry; 2005 Dec; 11(24):7276-93. PubMed ID: 16247825
    [TBL] [Abstract][Full Text] [Related]  

  • 12. Cooperative folding mechanism of a beta-hairpin peptide studied by a multicanonical replica-exchange molecular dynamics simulation.
    Yoda T; Sugita Y; Okamoto Y
    Proteins; 2007 Mar; 66(4):846-59. PubMed ID: 17173285
    [TBL] [Abstract][Full Text] [Related]  

  • 13. Protein refolding versus aggregation: computer simulations on an intermediate-resolution protein model.
    Smith AV; Hall CK
    J Mol Biol; 2001 Sep; 312(1):187-202. PubMed ID: 11545596
    [TBL] [Abstract][Full Text] [Related]  

  • 14. Examination of the folding of a short alanine-based helical peptide with salt bridges using molecular dynamics simulation.
    Wang WZ; Lin T; Sun YC
    J Phys Chem B; 2007 Apr; 111(13):3508-14. PubMed ID: 17388513
    [TBL] [Abstract][Full Text] [Related]  

  • 15. Influence of the environment in the conformation of alpha-helices studied by protein database search and molecular dynamics simulations.
    Olivella M; Deupi X; Govaerts C; Pardo L
    Biophys J; 2002 Jun; 82(6):3207-13. PubMed ID: 12023245
    [TBL] [Abstract][Full Text] [Related]  

  • 16. The occurrence of C--H...O hydrogen bonds in alpha-helices and helix termini in globular proteins.
    Manikandan K; Ramakumar S
    Proteins; 2004 Sep; 56(4):768-81. PubMed ID: 15281129
    [TBL] [Abstract][Full Text] [Related]  

  • 17. Correlation between molecular volume and effects of n-alcohols on human neuronal nicotinic acetylcholine receptors expressed in Xenopus oocytes.
    Godden EL; Harris RA; Dunwiddie TV
    J Pharmacol Exp Ther; 2001 Mar; 296(3):716-22. PubMed ID: 11181898
    [TBL] [Abstract][Full Text] [Related]  

  • 18. Solvent dependence of PII conformation in model alanine peptides.
    Liu Z; Chen K; Ng A; Shi Z; Woody RW; Kallenbach NR
    J Am Chem Soc; 2004 Nov; 126(46):15141-50. PubMed ID: 15548011
    [TBL] [Abstract][Full Text] [Related]  

  • 19. Molecular dynamics simulation of folding of a short helical peptide with many charged residues.
    Wei CC; Ho MH; Wang WH; Sun YC
    J Phys Chem B; 2005 Oct; 109(42):19980-6. PubMed ID: 16853583
    [TBL] [Abstract][Full Text] [Related]  

  • 20. Molecular mechanism for the effects of trehalose on beta-hairpin folding revealed by molecular dynamics simulation.
    Liu FF; Dong XY; Sun Y
    J Mol Graph Model; 2008 Nov; 27(4):421-9. PubMed ID: 18778961
    [TBL] [Abstract][Full Text] [Related]  

    [Next]    [New Search]
    of 9.