239 related articles for article (PubMed ID: 10331260)
1. Evolutionary instability of operon structures disclosed by sequence comparisons of complete microbial genomes.
Itoh T; Takemoto K; Mori H; Gojobori T
Mol Biol Evol; 1999 Mar; 16(3):332-46. PubMed ID: 10331260
[TBL] [Abstract][Full Text] [Related]
2. Analysis of the cellular functions of Escherichia coli operons and their conservation in Bacillus subtilis.
de Daruvar A; Collado-Vides J; Valencia A
J Mol Evol; 2002 Aug; 55(2):211-21. PubMed ID: 12107597
[TBL] [Abstract][Full Text] [Related]
3. Conserved Units of Co-Expression in Bacterial Genomes: An Evolutionary Insight into Transcriptional Regulation.
Junier I; Rivoire O
PLoS One; 2016; 11(5):e0155740. PubMed ID: 27195891
[TBL] [Abstract][Full Text] [Related]
4. Operon conservation from the point of view of Escherichia coli, and inference of functional interdependence of gene products from genome context.
Moreno-Hagelsieb G; Collado-Vides J
In Silico Biol; 2002; 2(2):87-95. PubMed ID: 12066843
[TBL] [Abstract][Full Text] [Related]
5. The operonic location of auto-transcriptional repressors is highly conserved in bacteria.
Rubinstein ND; Zeevi D; Oren Y; Segal G; Pupko T
Mol Biol Evol; 2011 Dec; 28(12):3309-18. PubMed ID: 21690561
[TBL] [Abstract][Full Text] [Related]
6. Characterization of relationships between transcriptional units and operon structures in Bacillus subtilis and Escherichia coli.
Okuda S; Kawashima S; Kobayashi K; Ogasawara N; Kanehisa M; Goto S
BMC Genomics; 2007 Feb; 8():48. PubMed ID: 17298663
[TBL] [Abstract][Full Text] [Related]
7. Genomic arrangement of bacterial operons is constrained by biological pathways encoded in the genome.
Yin Y; Zhang H; Olman V; Xu Y
Proc Natl Acad Sci U S A; 2010 Apr; 107(14):6310-5. PubMed ID: 20308592
[TBL] [Abstract][Full Text] [Related]
8. The life-cycle of operons.
Price MN; Arkin AP; Alm EJ
PLoS Genet; 2006 Jun; 2(6):e96. PubMed ID: 16789824
[TBL] [Abstract][Full Text] [Related]
9. The distinctive signatures of promoter regions and operon junctions across prokaryotes.
Janga SC; Lamboy WF; Huerta AM; Moreno-Hagelsieb G
Nucleic Acids Res; 2006; 34(14):3980-7. PubMed ID: 16914446
[TBL] [Abstract][Full Text] [Related]
10. Operon prediction based on SVM.
Zhang GQ; Cao ZW; Luo QM; Cai YD; Li YX
Comput Biol Chem; 2006 Jun; 30(3):233-40. PubMed ID: 16716751
[TBL] [Abstract][Full Text] [Related]
11. Conservation of gene co-regulation between two prokaryotes: Bacillus subtilis and Escherichia coli.
Okuda S; Kawashima S; Goto S; Kanehisa M
Genome Inform; 2005; 16(1):116-24. PubMed ID: 16362913
[TBL] [Abstract][Full Text] [Related]
12. The dnd operon for DNA phosphorothioation modification system in Escherichia coli is located in diverse genomic islands.
Ho WS; Ou HY; Yeo CC; Thong KL
BMC Genomics; 2015 Mar; 16(1):199. PubMed ID: 25879448
[TBL] [Abstract][Full Text] [Related]
13. Computational approaches for the analysis of gene neighbourhoods in prokaryotic genomes.
Rogozin IB; Makarova KS; Wolf YI; Koonin EV
Brief Bioinform; 2004 Jun; 5(2):131-49. PubMed ID: 15260894
[TBL] [Abstract][Full Text] [Related]
14. A Search for Ribonucleic Antiterminator Sites in Bacterial Genomes: Not Only Antitermination?
Gordon N; Rosenblum R; Nussbaum-Shochat A; Eliahoo E; Amster-Choder O
J Mol Microbiol Biotechnol; 2015; 25(2-3):143-53. PubMed ID: 26159075
[TBL] [Abstract][Full Text] [Related]
15. Operon prediction using both genome-specific and general genomic information.
Dam P; Olman V; Harris K; Su Z; Xu Y
Nucleic Acids Res; 2007; 35(1):288-98. PubMed ID: 17170009
[TBL] [Abstract][Full Text] [Related]
16. Gene cluster analysis method identifies horizontally transferred genes with high reliability and indicates that they provide the main mechanism of operon gain in 8 species of gamma-Proteobacteria.
Homma K; Fukuchi S; Nakamura Y; Gojobori T; Nishikawa K
Mol Biol Evol; 2007 Mar; 24(3):805-13. PubMed ID: 17185745
[TBL] [Abstract][Full Text] [Related]
17. Detecting uber-operons in prokaryotic genomes.
Che D; Li G; Mao F; Wu H; Xu Y
Nucleic Acids Res; 2006; 34(8):2418-27. PubMed ID: 16682449
[TBL] [Abstract][Full Text] [Related]
18. Complete nucleotide sequence of the S10-spc operon of phytoplasma: gene organization and genetic code resemble those of Bacillus subtilis.
Miyata S; Furuki K; Oshima K; Sawayanagi T; Nishigawa H; Kakizawa S; Jung HY; Ugaki M; Namba S
DNA Cell Biol; 2002 Jul; 21(7):527-34. PubMed ID: 12162807
[TBL] [Abstract][Full Text] [Related]
19. Organisation of the S10, spc and alpha ribosomal protein gene clusters in prokaryotic genomes.
Coenye T; Vandamme P
FEMS Microbiol Lett; 2005 Jan; 242(1):117-26. PubMed ID: 15621428
[TBL] [Abstract][Full Text] [Related]
20. [Computer analysis of regulatory signals in complete bacterial genomes. Translation initiation of ribosomal protein operons].
Vitreshchak A; Bansal AK; Titov II; Gel'fand MS
Biofizika; 1999; 44(4):601-10. PubMed ID: 10544808
[TBL] [Abstract][Full Text] [Related]
[Next] [New Search]