BIOMARKERS

Molecular Biopsy of Human Tumors

- a resource for Precision Medicine *

148 related articles for article (PubMed ID: 10438622)

  • 1. Nucleotide analog interference mapping of the hairpin ribozyme: implications for secondary and tertiary structure formation.
    Ryder SP; Strobel SA
    J Mol Biol; 1999 Aug; 291(2):295-311. PubMed ID: 10438622
    [TBL] [Abstract][Full Text] [Related]  

  • 2. Structure-mapping of the hairpin ribozyme. Magnesium-dependent folding and evidence for tertiary interactions within the ribozyme-substrate complex.
    Butcher SE; Burke JM
    J Mol Biol; 1994 Nov; 244(1):52-63. PubMed ID: 7966321
    [TBL] [Abstract][Full Text] [Related]  

  • 3. A chemical phylogeny of group I introns based upon interference mapping of a bacterial ribozyme.
    Strauss-Soukup JK; Strobel SA
    J Mol Biol; 2000 Sep; 302(2):339-58. PubMed ID: 10970738
    [TBL] [Abstract][Full Text] [Related]  

  • 4. Solution structure of the loop B domain from the hairpin ribozyme.
    Butcher SE; Allain FH; Feigon J
    Nat Struct Biol; 1999 Mar; 6(3):212-6. PubMed ID: 10074938
    [TBL] [Abstract][Full Text] [Related]  

  • 5. Investigation of adenosine base ionization in the hairpin ribozyme by nucleotide analog interference mapping.
    Ryder SP; Oyelere AK; Padilla JL; Klostermeier D; Millar DP; Strobel SA
    RNA; 2001 Oct; 7(10):1454-63. PubMed ID: 11680850
    [TBL] [Abstract][Full Text] [Related]  

  • 6. Role of an active site adenine in hairpin ribozyme catalysis.
    Kuzmin YI; Da Costa CP; Cottrell JW; Fedor MJ
    J Mol Biol; 2005 Jun; 349(5):989-1010. PubMed ID: 15907933
    [TBL] [Abstract][Full Text] [Related]  

  • 7. Identifying RNA minor groove tertiary contacts by nucleotide analogue interference mapping with N2-methylguanosine.
    Ortoleva-Donnelly L; Kronman M; Strobel SA
    Biochemistry; 1998 Sep; 37(37):12933-42. PubMed ID: 9737873
    [TBL] [Abstract][Full Text] [Related]  

  • 8. A hydrogen-bonding triad stabilizes the chemical transition state of a group I ribozyme.
    Strobel SA; Ortoleva-Donnelly L
    Chem Biol; 1999 Mar; 6(3):153-65. PubMed ID: 10074469
    [TBL] [Abstract][Full Text] [Related]  

  • 9. Inter-domain cross-linking and molecular modelling of the hairpin ribozyme.
    Earnshaw DJ; Masquida B; Müller S; Sigurdsson ST; Eckstein F; Westhof E; Gait MJ
    J Mol Biol; 1997 Nov; 274(2):197-212. PubMed ID: 9398527
    [TBL] [Abstract][Full Text] [Related]  

  • 10. Catalytic strategies of self-cleaving ribozymes.
    Cochrane JC; Strobel SA
    Acc Chem Res; 2008 Aug; 41(8):1027-35. PubMed ID: 18652494
    [TBL] [Abstract][Full Text] [Related]  

  • 11. Structure of an anti-HIV-1 hammerhead ribozyme complex with a 17-mer DNA substrate analog of HIV-1 gag RNA and a mechanism for the cleavage reaction: 750 MHz NMR and computer experiments.
    Ojha RP; Dhingra MM; Sarma MH; Myer YP; Setlik RF; Shibata M; Kazim AL; Ornstein RL; Rein R; Turner CJ; Sarma RH
    J Biomol Struct Dyn; 1997 Oct; 15(2):185-215. PubMed ID: 9399149
    [TBL] [Abstract][Full Text] [Related]  

  • 12. Crystal structure of a hairpin ribozyme-inhibitor complex with implications for catalysis.
    Rupert PB; Ferré-D'Amaré AR
    Nature; 2001 Apr; 410(6830):780-6. PubMed ID: 11298439
    [TBL] [Abstract][Full Text] [Related]  

  • 13. Structure and activity of the hairpin ribozyme in its natural junction conformation: effect of metal ions.
    Walter F; Murchie AI; Thomson JB; Lilley DM
    Biochemistry; 1998 Oct; 37(40):14195-203. PubMed ID: 9760257
    [TBL] [Abstract][Full Text] [Related]  

  • 14. NMR structure of varkud satellite ribozyme stem-loop V in the presence of magnesium ions and localization of metal-binding sites.
    Campbell DO; Bouchard P; Desjardins G; Legault P
    Biochemistry; 2006 Sep; 45(35):10591-605. PubMed ID: 16939211
    [TBL] [Abstract][Full Text] [Related]  

  • 15. The structure of the isolated, central hairpin of the HDV antigenomic ribozyme: novel structural features and similarity of the loop in the ribozyme and free in solution.
    Kolk MH; Heus HA; Hilbers CW
    EMBO J; 1997 Jun; 16(12):3685-92. PubMed ID: 9218809
    [TBL] [Abstract][Full Text] [Related]  

  • 16. The secondary structure of a fourteen-nucleotide fragment of the hairpin ribozyme.
    Brinegar JD; Hampel A; Alter GM; Cruz P
    Biochem Biophys Res Commun; 1997 Mar; 232(2):444-8. PubMed ID: 9125198
    [TBL] [Abstract][Full Text] [Related]  

  • 17. Alignment of the two domains of the hairpin ribozyme-substrate complex defined by interdomain photoaffinity crosslinking.
    Pinard R; Heckman JE; Burke JM
    J Mol Biol; 1999 Mar; 287(2):239-51. PubMed ID: 10080888
    [TBL] [Abstract][Full Text] [Related]  

  • 18. Solution structure of loop A from the hairpin ribozyme from tobacco ringspot virus satellite.
    Cai Z; Tinoco I
    Biochemistry; 1996 May; 35(19):6026-36. PubMed ID: 8634244
    [TBL] [Abstract][Full Text] [Related]  

  • 19. Comparative analysis of hairpin ribozyme structures and interference data.
    Ryder SP; Strobel SA
    Nucleic Acids Res; 2002 Mar; 30(6):1287-91. PubMed ID: 11884625
    [TBL] [Abstract][Full Text] [Related]  

  • 20. Ionization of a critical adenosine residue in the neurospora Varkud Satellite ribozyme active site.
    Jones FD; Strobel SA
    Biochemistry; 2003 Apr; 42(14):4265-76. PubMed ID: 12680781
    [TBL] [Abstract][Full Text] [Related]  

    [Next]    [New Search]
    of 8.