These tools will no longer be maintained as of December 31, 2024. Archived website can be found here. PubMed4Hh GitHub repository can be found here. Contact NLM Customer Service if you have questions.


BIOMARKERS

Molecular Biopsy of Human Tumors

- a resource for Precision Medicine *

108 related articles for article (PubMed ID: 10479734)

  • 1. 600 ps molecular dynamics reveals stable substructures and flexible hinge points in cAMP dependent protein kinase.
    Tsigelny I; Greenberg JP; Cox S; Nichols WL; Taylor SS; Ten Eyck LF
    Biopolymers; 1999 Oct; 50(5):513-24. PubMed ID: 10479734
    [TBL] [Abstract][Full Text] [Related]  

  • 2. Crystal structure of a polyhistidine-tagged recombinant catalytic subunit of cAMP-dependent protein kinase complexed with the peptide inhibitor PKI(5-24) and adenosine.
    Narayana N; Cox S; Shaltiel S; Taylor SS; Xuong N
    Biochemistry; 1997 Apr; 36(15):4438-48. PubMed ID: 9109651
    [TBL] [Abstract][Full Text] [Related]  

  • 3. Influence of multiple well defined conformations on small-angle scattering of proteins in solution.
    Heller WT
    Acta Crystallogr D Biol Crystallogr; 2005 Jan; 61(Pt 1):33-44. PubMed ID: 15608373
    [TBL] [Abstract][Full Text] [Related]  

  • 4. Endogenous tryptophan residues of cAPK regulatory subunit type IIbeta reveal local variations in environments and dynamics.
    Zawadzki KM; Pan CP; Barkley MD; Johnson D; Taylor SS
    Proteins; 2003 Jun; 51(4):552-61. PubMed ID: 12784214
    [TBL] [Abstract][Full Text] [Related]  

  • 5. A molecular dynamics analysis of protein structural elements.
    Post CB; Dobson CM; Karplus M
    Proteins; 1989; 5(4):337-54. PubMed ID: 2798410
    [TBL] [Abstract][Full Text] [Related]  

  • 6. Backbone flexibility of five sites on the catalytic subunit of cAMP-dependent protein kinase in the open and closed conformations.
    Gangal M; Cox S; Lew J; Clifford T; Garrod SM; Aschbaher M; Taylor SS; Johnson DA
    Biochemistry; 1998 Sep; 37(39):13728-35. PubMed ID: 9753461
    [TBL] [Abstract][Full Text] [Related]  

  • 7. Investigation of the mechanism of domain closure in citrate synthase by molecular dynamics simulation.
    Roccatano D; Mark AE; Hayward S
    J Mol Biol; 2001 Jul; 310(5):1039-53. PubMed ID: 11501994
    [TBL] [Abstract][Full Text] [Related]  

  • 8. Dynamic binding of PKA regulatory subunit RI alpha.
    Gullingsrud J; Kim C; Taylor SS; McCammon JA
    Structure; 2006 Jan; 14(1):141-9. PubMed ID: 16407073
    [TBL] [Abstract][Full Text] [Related]  

  • 9. Probing cAMP-dependent protein kinase holoenzyme complexes I alpha and II beta by FT-IR and chemical protein footprinting.
    Yu S; Mei FC; Lee JC; Cheng X
    Biochemistry; 2004 Feb; 43(7):1908-20. PubMed ID: 14967031
    [TBL] [Abstract][Full Text] [Related]  

  • 10. Structure and dynamics of phospholamban in solution and in membrane bilayer: computer simulations.
    Houndonougbo Y; Kuczera K; Jas GS
    Biochemistry; 2005 Feb; 44(6):1780-92. PubMed ID: 15697203
    [TBL] [Abstract][Full Text] [Related]  

  • 11. Release of ADP from the catalytic subunit of protein kinase A: a molecular dynamics simulation study.
    Lu B; Wong CF; McCammon JA
    Protein Sci; 2005 Jan; 14(1):159-68. PubMed ID: 15608120
    [TBL] [Abstract][Full Text] [Related]  

  • 12. Molecular dynamics of amicyanin reveals a conserved dynamical core for blue copper proteins.
    Rizzuti B; Sportelli L; Guzzi R
    Proteins; 2009 Mar; 74(4):961-71. PubMed ID: 18767164
    [TBL] [Abstract][Full Text] [Related]  

  • 13. Molecular docking of balanol to dynamics snapshots of protein kinase A.
    Wong CF; Kua J; Zhang Y; Straatsma TP; McCammon JA
    Proteins; 2005 Dec; 61(4):850-8. PubMed ID: 16245317
    [TBL] [Abstract][Full Text] [Related]  

  • 14. Conformational selection of protein kinase A revealed by flexible-ligand flexible-protein docking.
    Huang Z; Wong CF
    J Comput Chem; 2009 Mar; 30(4):631-44. PubMed ID: 18711718
    [TBL] [Abstract][Full Text] [Related]  

  • 15. Crystal structure of a complex between the catalytic and regulatory (RIalpha) subunits of PKA.
    Kim C; Xuong NH; Taylor SS
    Science; 2005 Feb; 307(5710):690-6. PubMed ID: 15692043
    [TBL] [Abstract][Full Text] [Related]  

  • 16. Influence of the environment in the conformation of alpha-helices studied by protein database search and molecular dynamics simulations.
    Olivella M; Deupi X; Govaerts C; Pardo L
    Biophys J; 2002 Jun; 82(6):3207-13. PubMed ID: 12023245
    [TBL] [Abstract][Full Text] [Related]  

  • 17. Conformational differences among solution structures of the type Ialpha, IIalpha and IIbeta protein kinase A regulatory subunit homodimers: role of the linker regions.
    Vigil D; Blumenthal DK; Heller WT; Brown S; Canaves JM; Taylor SS; Trewhella J
    J Mol Biol; 2004 Apr; 337(5):1183-94. PubMed ID: 15046986
    [TBL] [Abstract][Full Text] [Related]  

  • 18. Structure of the unliganded cAMP-dependent protein kinase catalytic subunit from Saccharomyces cerevisiae.
    Mashhoon N; Carmel G; Pflugrath JW; Kuret J
    Arch Biochem Biophys; 2001 Mar; 387(1):11-9. PubMed ID: 11368172
    [TBL] [Abstract][Full Text] [Related]  

  • 19. Definition of an electrostatic relay switch critical for the cAMP-dependent activation of protein kinase A as revealed by the D170A mutant of RIalpha.
    Abu-Abed M; Das R; Wang L; Melacini G
    Proteins; 2007 Oct; 69(1):112-24. PubMed ID: 17596845
    [TBL] [Abstract][Full Text] [Related]  

  • 20. BlockMaster: partitioning protein kinase structures using normal-mode analysis.
    Shudler M; Niv MY
    J Phys Chem A; 2009 Jul; 113(26):7528-34. PubMed ID: 19485335
    [TBL] [Abstract][Full Text] [Related]  

    [Next]    [New Search]
    of 6.