These tools will no longer be maintained as of December 31, 2024. Archived website can be found here. PubMed4Hh GitHub repository can be found here. Contact NLM Customer Service if you have questions.


BIOMARKERS

Molecular Biopsy of Human Tumors

- a resource for Precision Medicine *

100 related articles for article (PubMed ID: 10487872)

  • 1. Investigating extended regulatory regions of genomic DNA sequences.
    Babenko VN; Kosarev PS; Vishnevsky OV; Levitsky VG; Basin VV; Frolov AS
    Bioinformatics; 1999; 15(7-8):644-53. PubMed ID: 10487872
    [TBL] [Abstract][Full Text] [Related]  

  • 2. Integrated databases and computer systems for studying eukaryotic gene expression.
    Kolchanov NA; Ponomarenko MP; Frolov AS; Ananko EA; Kolpakov FA; Ignatieva EV; Podkolodnaya OA; Goryachkovskaya TN; Stepanenko IL; Merkulova TI; Babenko VV; Ponomarenko YV; Kochetov AV; Podkolodny NL; Vorobiev DV; Lavryushev SV; Grigorovich DA; Kondrakhin YV; Milanesi L; Wingender E; Solovyev V; Overton GC
    Bioinformatics; 1999; 15(7-8):669-86. PubMed ID: 10487874
    [TBL] [Abstract][Full Text] [Related]  

  • 3. Conformational and physicochemical DNA features specific for transcription factor binding sites.
    Ponomarenko JV; Ponomarenko MP; Frolov AS; Vorobyev DG; Overton GC; Kolchanov NA
    Bioinformatics; 1999; 15(7-8):654-68. PubMed ID: 10487873
    [TBL] [Abstract][Full Text] [Related]  

  • 4. Identification of sequence-dependent DNA features correlating to activity of DNA sites interacting with proteins.
    Ponomarenko MP; Ponomarenko JV; Frolov AS; Podkolodny NL; Savinkova LK; Kolchanov NA; Overton GC
    Bioinformatics; 1999; 15(7-8):687-703. PubMed ID: 10487875
    [TBL] [Abstract][Full Text] [Related]  

  • 5. Recognition of eukaryotic promoters using a genetic algorithm based on iterative discriminant analysis.
    Levitsky VG; Katokhin AV
    In Silico Biol; 2003; 3(1-2):81-7. PubMed ID: 12762848
    [TBL] [Abstract][Full Text] [Related]  

  • 6. GeneBuilder: interactive in silico prediction of gene structure.
    Milanesi L; D'Angelo D; Rogozin IB
    Bioinformatics; 1999; 15(7-8):612-21. PubMed ID: 10487869
    [TBL] [Abstract][Full Text] [Related]  

  • 7. [Computer analysis and recognition of Drosophila melanogaster gene promoters].
    Levitskiĭ VG; Katokhin AV
    Mol Biol (Mosk); 2001; 35(6):970-8. PubMed ID: 11771144
    [TBL] [Abstract][Full Text] [Related]  

  • 8. RECON: a program for prediction of nucleosome formation potential.
    Levitsky VG
    Nucleic Acids Res; 2004 Jul; 32(Web Server issue):W346-9. PubMed ID: 15215408
    [TBL] [Abstract][Full Text] [Related]  

  • 9. PromFD 1.0: a computer program that predicts eukaryotic pol II promoters using strings and IMD matrices.
    Chen QK; Hertz GZ; Stormo GD
    Comput Appl Biosci; 1997 Feb; 13(1):29-35. PubMed ID: 9088706
    [TBL] [Abstract][Full Text] [Related]  

  • 10. [Analysis and recognition of promoters for erythroid-specific genes based on degenerative oligonucleotide motifs].
    Vishnevskiĭ OV; Vitiaev EE
    Mol Biol (Mosk); 2001; 35(6):979-86. PubMed ID: 11771145
    [TBL] [Abstract][Full Text] [Related]  

  • 11. ARGO: a web system for the detection of degenerate motifs and large-scale recognition of eukaryotic promoters.
    Vishnevsky OV; Kolchanov NA
    Nucleic Acids Res; 2005 Jul; 33(Web Server issue):W417-22. PubMed ID: 15980502
    [TBL] [Abstract][Full Text] [Related]  

  • 12. Nucleosome formation potential of eukaryotic DNA: calculation and promoters analysis.
    Levitsky VG; Podkolodnaya OA; Kolchanov NA; Podkolodny NL
    Bioinformatics; 2001 Nov; 17(11):998-1010. PubMed ID: 11724728
    [TBL] [Abstract][Full Text] [Related]  

  • 13. Prevalence of the initiator over the TATA box in human and yeast genes and identification of DNA motifs enriched in human TATA-less core promoters.
    Yang C; Bolotin E; Jiang T; Sladek FM; Martinez E
    Gene; 2007 Mar; 389(1):52-65. PubMed ID: 17123746
    [TBL] [Abstract][Full Text] [Related]  

  • 14. Eukaryotic promoter recognition by binding sites for transcription factors.
    Kondrakhin YV; Kel AE; Kolchanov NA; Romashchenko AG; Milanesi L
    Comput Appl Biosci; 1995 Oct; 11(5):477-88. PubMed ID: 8590170
    [TBL] [Abstract][Full Text] [Related]  

  • 15. Nucleosomal DNA property database.
    Levitsky VG; Ponomarenko MP; Ponomarenko JV; Frolov AS; Kolchanov NA
    Bioinformatics; 1999; 15(7-8):582-92. PubMed ID: 10487866
    [TBL] [Abstract][Full Text] [Related]  

  • 16. Computer system "gene discovery" for promoter structure analysis.
    Vityaev EE; Orlov YL; Vishnevsky OV; Pozdnyakov MA; Kolchanov NA
    In Silico Biol; 2002; 2(3):257-62. PubMed ID: 12542411
    [TBL] [Abstract][Full Text] [Related]  

  • 17. Oligonucleotide frequency matrices addressed to recognizing functional DNA sites.
    Ponomarenko MP; Ponomarenko JV; Frolov AS; Podkolodnaya OA; Vorobyev DG; Kolchanov NA; Overton GC
    Bioinformatics; 1999; 15(7-8):631-43. PubMed ID: 10487871
    [TBL] [Abstract][Full Text] [Related]  

  • 18. PromH: Promoters identification using orthologous genomic sequences.
    Solovyev VV; Shahmuradov IA
    Nucleic Acids Res; 2003 Jul; 31(13):3540-5. PubMed ID: 12824362
    [TBL] [Abstract][Full Text] [Related]  

  • 19. Promoter2.0: for the recognition of PolII promoter sequences.
    Knudsen S
    Bioinformatics; 1999 May; 15(5):356-61. PubMed ID: 10366655
    [TBL] [Abstract][Full Text] [Related]  

  • 20. Computer tool FUNSITE for analysis of eukaryotic regulatory genomic sequences.
    Kel AE; Kondrakhin YV; Kolpakov PhA ; Kel OV; Romashenko AG; Wingender E; Milanesi L; Kolchanov NA
    Proc Int Conf Intell Syst Mol Biol; 1995; 3():197-205. PubMed ID: 7584437
    [TBL] [Abstract][Full Text] [Related]  

    [Next]    [New Search]
    of 5.