These tools will no longer be maintained as of December 31, 2024. Archived website can be found here. PubMed4Hh GitHub repository can be found here. Contact NLM Customer Service if you have questions.


BIOMARKERS

Molecular Biopsy of Human Tumors

- a resource for Precision Medicine *

90 related articles for article (PubMed ID: 10498780)

  • 21. The FOLDALIGN web server for pairwise structural RNA alignment and mutual motif search.
    Havgaard JH; Lyngsø RB; Gorodkin J
    Nucleic Acids Res; 2005 Jul; 33(Web Server issue):W650-3. PubMed ID: 15980555
    [TBL] [Abstract][Full Text] [Related]  

  • 22. Dotlet: diagonal plots in a web browser.
    Junier T; Pagni M
    Bioinformatics; 2000 Feb; 16(2):178-9. PubMed ID: 10842741
    [TBL] [Abstract][Full Text] [Related]  

  • 23. Multiple sequence alignment with the Clustal series of programs.
    Chenna R; Sugawara H; Koike T; Lopez R; Gibson TJ; Higgins DG; Thompson JD
    Nucleic Acids Res; 2003 Jul; 31(13):3497-500. PubMed ID: 12824352
    [TBL] [Abstract][Full Text] [Related]  

  • 24. Foldalign 2.5: multithreaded implementation for pairwise structural RNA alignment.
    Sundfeld D; Havgaard JH; de Melo AC; Gorodkin J
    Bioinformatics; 2016 Apr; 32(8):1238-40. PubMed ID: 26704597
    [TBL] [Abstract][Full Text] [Related]  

  • 25. CLANS: a Java application for visualizing protein families based on pairwise similarity.
    Frickey T; Lupas A
    Bioinformatics; 2004 Dec; 20(18):3702-4. PubMed ID: 15284097
    [TBL] [Abstract][Full Text] [Related]  

  • 26. Visualizing profile-profile alignment: pairwise HMM logos.
    Schuster-Böckler B; Bateman A
    Bioinformatics; 2005 Jun; 21(12):2912-3. PubMed ID: 15827079
    [TBL] [Abstract][Full Text] [Related]  

  • 27. GATA: a graphic alignment tool for comparative sequence analysis.
    Nix DA; Eisen MB
    BMC Bioinformatics; 2005 Jan; 6():9. PubMed ID: 15655071
    [TBL] [Abstract][Full Text] [Related]  

  • 28. Stochastic pairwise alignments.
    Mückstein U; Hofacker IL; Stadler PF
    Bioinformatics; 2002; 18 Suppl 2():S153-60. PubMed ID: 12385998
    [TBL] [Abstract][Full Text] [Related]  

  • 29. ALP & FALP: C++ libraries for pairwise local alignment E-values.
    Sheetlin S; Park Y; Frith MC; Spouge JL
    Bioinformatics; 2016 Jan; 32(2):304-5. PubMed ID: 26428291
    [TBL] [Abstract][Full Text] [Related]  

  • 30. ALIGN_MTX--an optimal pairwise textual sequence alignment program, adapted for using in sequence-structure alignment.
    Vishnepolsky B; Pirtskhalava M
    Comput Biol Chem; 2009 Jun; 33(3):235-8. PubMed ID: 19477686
    [TBL] [Abstract][Full Text] [Related]  

  • 31. OXBench: a benchmark for evaluation of protein multiple sequence alignment accuracy.
    Raghava GP; Searle SM; Audley PC; Barber JD; Barton GJ
    BMC Bioinformatics; 2003 Oct; 4():47. PubMed ID: 14552658
    [TBL] [Abstract][Full Text] [Related]  

  • 32. ESPript: analysis of multiple sequence alignments in PostScript.
    Gouet P; Courcelle E; Stuart DI; Métoz F
    Bioinformatics; 1999 Apr; 15(4):305-8. PubMed ID: 10320398
    [TBL] [Abstract][Full Text] [Related]  

  • 33. VISTAL--a new 2D visualization tool of protein 3D structural alignments.
    Kolodny R; Honig B
    Bioinformatics; 2006 Sep; 22(17):2166-7. PubMed ID: 16837525
    [TBL] [Abstract][Full Text] [Related]  

  • 34. CD-Search: protein domain annotations on the fly.
    Marchler-Bauer A; Bryant SH
    Nucleic Acids Res; 2004 Jul; 32(Web Server issue):W327-31. PubMed ID: 15215404
    [TBL] [Abstract][Full Text] [Related]  

  • 35. Using sequence motifs for enhanced neural network prediction of protein distance constraints.
    Gorodkin J; Lund O; Andersen CA; Brunak S
    Proc Int Conf Intell Syst Mol Biol; 1999; ():95-105. PubMed ID: 10786291
    [TBL] [Abstract][Full Text] [Related]  

  • 36. SEM (Symmetry Equivalent Molecules): A web-based GUI to generate and visualize the macromolecules.
    Hussain AS; Kumar ChK; Rajesh CK; Sheik SS; Sekar K
    Nucleic Acids Res; 2003 Jul; 31(13):3356-8. PubMed ID: 12824326
    [TBL] [Abstract][Full Text] [Related]  

  • 37. The PredictProtein server.
    Rost B; Yachdav G; Liu J
    Nucleic Acids Res; 2004 Jul; 32(Web Server issue):W321-6. PubMed ID: 15215403
    [TBL] [Abstract][Full Text] [Related]  

  • 38. Integrating protein annotation resources through the Distributed Annotation System.
    Olason PI
    Nucleic Acids Res; 2005 Jul; 33(Web Server issue):W468-70. PubMed ID: 15980514
    [TBL] [Abstract][Full Text] [Related]  

  • 39. Optimizing the size of the sequence profiles to increase the accuracy of protein sequence alignments generated by profile-profile algorithms.
    Poleksic A; Fienup M
    Bioinformatics; 2008 May; 24(9):1145-53. PubMed ID: 18337259
    [TBL] [Abstract][Full Text] [Related]  

  • 40. PASS2: an automated database of protein alignments organised as structural superfamilies.
    Bhaduri A; Pugalenthi G; Sowdhamini R
    BMC Bioinformatics; 2004 Apr; 5():35. PubMed ID: 15059245
    [TBL] [Abstract][Full Text] [Related]  

    [Previous]   [Next]    [New Search]
    of 5.