443 related articles for article (PubMed ID: 10563013)
1. A method for detecting positive selection at single amino acid sites.
Suzuki Y; Gojobori T
Mol Biol Evol; 1999 Oct; 16(10):1315-28. PubMed ID: 10563013
[TBL] [Abstract][Full Text] [Related]
2. New methods for detecting positive selection at single amino acid sites.
Suzuki Y
J Mol Evol; 2004 Jul; 59(1):11-9. PubMed ID: 15383903
[TBL] [Abstract][Full Text] [Related]
3. Inferring natural selection operating on conservative and radical substitution at single amino acid sites.
Suzuki Y
Genes Genet Syst; 2007 Aug; 82(4):341-60. PubMed ID: 17895585
[TBL] [Abstract][Full Text] [Related]
4. Codon-substitution models for heterogeneous selection pressure at amino acid sites.
Yang Z; Nielsen R; Goldman N; Pedersen AM
Genetics; 2000 May; 155(1):431-49. PubMed ID: 10790415
[TBL] [Abstract][Full Text] [Related]
5. Not so different after all: a comparison of methods for detecting amino acid sites under selection.
Kosakovsky Pond SL; Frost SD
Mol Biol Evol; 2005 May; 22(5):1208-22. PubMed ID: 15703242
[TBL] [Abstract][Full Text] [Related]
6. Reevaluation of amino acid variability of the human immunodeficiency virus type 1 gp120 envelope glycoprotein and prediction of new discontinuous epitopes.
Yamaguchi-Kabata Y; Gojobori T
J Virol; 2000 May; 74(9):4335-50. PubMed ID: 10756049
[TBL] [Abstract][Full Text] [Related]
7. Accuracy and power of statistical methods for detecting adaptive evolution in protein coding sequences and for identifying positively selected sites.
Wong WS; Yang Z; Goldman N; Nielsen R
Genetics; 2004 Oct; 168(2):1041-51. PubMed ID: 15514074
[TBL] [Abstract][Full Text] [Related]
8. Likelihood models for detecting positively selected amino acid sites and applications to the HIV-1 envelope gene.
Nielsen R; Yang Z
Genetics; 1998 Mar; 148(3):929-36. PubMed ID: 9539414
[TBL] [Abstract][Full Text] [Related]
9. Detecting Adaptation in Protein-Coding Genes Using a Bayesian Site-Heterogeneous Mutation-Selection Codon Substitution Model.
Rodrigue N; Lartillot N
Mol Biol Evol; 2017 Jan; 34(1):204-214. PubMed ID: 27744408
[TBL] [Abstract][Full Text] [Related]
10. Reliabilities of parsimony-based and likelihood-based methods for detecting positive selection at single amino acid sites.
Suzuki Y; Nei M
Mol Biol Evol; 2001 Dec; 18(12):2179-85. PubMed ID: 11719567
[TBL] [Abstract][Full Text] [Related]
11. False-positive results obtained from the branch-site test of positive selection.
Suzuki Y
Genes Genet Syst; 2008 Aug; 83(4):331-8. PubMed ID: 18931458
[TBL] [Abstract][Full Text] [Related]
12. The site-wise log-likelihood score is a good predictor of genes under positive selection.
Wang HC; Susko E; Roger AJ
J Mol Evol; 2013 May; 76(5):280-94. PubMed ID: 23595859
[TBL] [Abstract][Full Text] [Related]
13. Detecting molecular adaptation at individual codons in the glycoprotein gene of the geographically diversified infectious hematopoietic necrosis virus, a fish rhabdovirus.
Padhi A; Verghese B
Virus Res; 2008 Mar; 132(1-2):229-36. PubMed ID: 18178282
[TBL] [Abstract][Full Text] [Related]
14. Site-to-site variation of synonymous substitution rates.
Pond SK; Muse SV
Mol Biol Evol; 2005 Dec; 22(12):2375-85. PubMed ID: 16107593
[TBL] [Abstract][Full Text] [Related]
15. Positive selection on the H3 hemagglutinin gene of human influenza virus A.
Bush RM; Fitch WM; Bender CA; Cox NJ
Mol Biol Evol; 1999 Nov; 16(11):1457-65. PubMed ID: 10555276
[TBL] [Abstract][Full Text] [Related]
16. Detecting positively selected sites from amino Acid sequences: an implicit codon model.
Ouyang Z; Liang J
Annu Int Conf IEEE Eng Med Biol Soc; 2007; 2007():5302-6. PubMed ID: 18003204
[TBL] [Abstract][Full Text] [Related]
17. Bursts of nonsynonymous substitutions in HIV-1 evolution reveal instances of positive selection at conservative protein sites.
Bazykin GA; Dushoff J; Levin SA; Kondrashov AS
Proc Natl Acad Sci U S A; 2006 Dec; 103(51):19396-401. PubMed ID: 17164328
[TBL] [Abstract][Full Text] [Related]
18. Frequent toggling between alternative amino acids is driven by selection in HIV-1.
Delport W; Scheffler K; Seoighe C
PLoS Pathog; 2008 Dec; 4(12):e1000242. PubMed ID: 19096508
[TBL] [Abstract][Full Text] [Related]
19. Heterogeneous selective pressure acting on influenza B Victoria- and Yamagata-like hemagglutinins.
Nunes B; Pechirra P; Coelho A; Ribeiro C; Arraiolos A; Rebelo-de-Andrade H
J Mol Evol; 2008 Oct; 67(4):427-35. PubMed ID: 18841406
[TBL] [Abstract][Full Text] [Related]
20. Spatial distribution of selection pressure on a protein based on the hierarchical Bayesian model.
Watabe T; Kishino H
Mol Biol Evol; 2013 Dec; 30(12):2714-22. PubMed ID: 24002809
[TBL] [Abstract][Full Text] [Related]
[Next] [New Search]
