503 related articles for article (PubMed ID: 10731417)
1. A dimeric DNA interface stabilized by stacked A.(G.G.G.G).A hexads and coordinated monovalent cations.
Kettani A; Gorin A; Majumdar A; Hermann T; Skripkin E; Zhao H; Jones R; Patel DJ
J Mol Biol; 2000 Mar; 297(3):627-44. PubMed ID: 10731417
[TBL] [Abstract][Full Text] [Related]
2. Dimeric DNA quadruplex containing major groove-aligned A-T-A-T and G-C-G-C tetrads stabilized by inter-subunit Watson-Crick A-T and G-C pairs.
Zhang N; Gorin A; Majumdar A; Kettani A; Chernichenko N; Skripkin E; Patel DJ
J Mol Biol; 2001 Oct; 312(5):1073-88. PubMed ID: 11580251
[TBL] [Abstract][Full Text] [Related]
3. A double chain reversal loop and two diagonal loops define the architecture of a unimolecular DNA quadruplex containing a pair of stacked G(syn)-G(syn)-G(anti)-G(anti) tetrads flanked by a G-(T-T) Triad and a T-T-T triple.
Kuryavyi V; Majumdar A; Shallop A; Chernichenko N; Skripkin E; Jones R; Patel DJ
J Mol Biol; 2001 Jun; 310(1):181-94. PubMed ID: 11419945
[TBL] [Abstract][Full Text] [Related]
4. Experimental demonstration of T:(G:G:G:G):T hexad and T:A:A:T tetrad alignments within a DNA quadruplex stem.
Webba da Silva M
Biochemistry; 2005 Mar; 44(10):3754-64. PubMed ID: 15751952
[TBL] [Abstract][Full Text] [Related]
5. V-shaped scaffold: a new architectural motif identified in an A x (G x G x G x G) pentad-containing dimeric DNA quadruplex involving stacked G(anti) x G(anti) x G(anti) x G(syn) tetrads.
Zhang N; Gorin A; Majumdar A; Kettani A; Chernichenko N; Skripkin E; Patel DJ
J Mol Biol; 2001 Aug; 311(5):1063-79. PubMed ID: 11531340
[TBL] [Abstract][Full Text] [Related]
6. A K cation-induced conformational switch within a loop spanning segment of a DNA quadruplex containing G-G-G-C repeats.
Bouaziz S; Kettani A; Patel DJ
J Mol Biol; 1998 Sep; 282(3):637-52. PubMed ID: 9737927
[TBL] [Abstract][Full Text] [Related]
7. A two-stranded template-based approach to G.(C-A) triad formation: designing novel structural elements into an existing DNA framework.
Kettani A; Basu G; Gorin A; Majumdar A; Skripkin E; Patel DJ
J Mol Biol; 2000 Aug; 301(1):129-46. PubMed ID: 10926497
[TBL] [Abstract][Full Text] [Related]
8. Solution structure of a Na cation stabilized DNA quadruplex containing G.G.G.G and G.C.G.C tetrads formed by G-G-G-C repeats observed in adeno-associated viral DNA.
Kettani A; Bouaziz S; Gorin A; Zhao H; Jones RA; Patel DJ
J Mol Biol; 1998 Sep; 282(3):619-36. PubMed ID: 9737926
[TBL] [Abstract][Full Text] [Related]
9. An intramolecular quadruplex of (GGA)(4) triplet repeat DNA with a G:G:G:G tetrad and a G(:A):G(:A):G(:A):G heptad, and its dimeric interaction.
Matsugami A; Ouhashi K; Kanagawa M; Liu H; Kanagawa S; Uesugi S; Katahira M
J Mol Biol; 2001 Oct; 313(2):255-69. PubMed ID: 11800555
[TBL] [Abstract][Full Text] [Related]
10. A dimeric RNA quadruplex architecture comprised of two G:G(:A):G:G(:A) hexads, G:G:G:G tetrads and UUUU loops.
Liu H; Matsugami A; Katahira M; Uesugi S
J Mol Biol; 2002 Oct; 322(5):955-70. PubMed ID: 12367521
[TBL] [Abstract][Full Text] [Related]
11. A diamond-shaped zipper-like DNA architecture containing triads sandwiched between mismatches and tetrads.
Kuryavyi V; Kettani A; Wang W; Jones R; Patel DJ
J Mol Biol; 2000 Jan; 295(3):455-69. PubMed ID: 10623538
[TBL] [Abstract][Full Text] [Related]
12. Association of DNA quadruplexes through G:C:G:C tetrads. Solution structure of d(GCGGTGGAT).
Webba da Silva M
Biochemistry; 2003 Dec; 42(49):14356-65. PubMed ID: 14661946
[TBL] [Abstract][Full Text] [Related]
13. Solution structure of the calicheamicin gamma 1I-DNA complex.
Kumar RA; Ikemoto N; Patel DJ
J Mol Biol; 1997 Jan; 265(2):187-201. PubMed ID: 9020982
[TBL] [Abstract][Full Text] [Related]
14. Water and ion binding around r(UpA)12 and d(TpA)12 oligomers--comparison with RNA and DNA (CpG)12 duplexes.
Auffinger P; Westhof E
J Mol Biol; 2001 Feb; 305(5):1057-72. PubMed ID: 11162114
[TBL] [Abstract][Full Text] [Related]
15. Centromeric pyrimidine strands fold into an intercalated motif by forming a double hairpin with a novel T:G:G:T tetrad: solution structure of the d(TCCCGTTTCCA) dimer.
Gallego J; Chou SH; Reid BR
J Mol Biol; 1997 Nov; 273(4):840-56. PubMed ID: 9367776
[TBL] [Abstract][Full Text] [Related]
16. 1 A crystal structures of B-DNA reveal sequence-specific binding and groove-specific bending of DNA by magnesium and calcium.
Chiu TK; Dickerson RE
J Mol Biol; 2000 Aug; 301(4):915-45. PubMed ID: 10966796
[TBL] [Abstract][Full Text] [Related]
17. Four-stranded DNA structure stabilized by a novel G:C:A:T tetrad.
Escaja N; Gelpí JL; Orozco M; Rico M; Pedroso E; González C
J Am Chem Soc; 2003 May; 125(19):5654-62. PubMed ID: 12733903
[TBL] [Abstract][Full Text] [Related]
18. Small change in a G-rich sequence, a dramatic change in topology: new dimeric G-quadruplex folding motif with unique loop orientations.
Crnugelj M; Sket P; Plavec J
J Am Chem Soc; 2003 Jul; 125(26):7866-71. PubMed ID: 12823005
[TBL] [Abstract][Full Text] [Related]
19. Stability and cations coordination of DNA and RNA 14-mer G-quadruplexes: a multiscale computational approach.
Pagano B; Mattia CA; Cavallo L; Uesugi S; Giancola C; Fraternali F
J Phys Chem B; 2008 Sep; 112(38):12115-23. PubMed ID: 18767769
[TBL] [Abstract][Full Text] [Related]
20. Binding sites and dynamics of ammonium ions in a telomere repeat DNA quadruplex.
Hud NV; Schultze P; Sklenár V; Feigon J
J Mol Biol; 1999 Jan; 285(1):233-43. PubMed ID: 9878402
[TBL] [Abstract][Full Text] [Related]
[Next] [New Search]