203 related articles for article (PubMed ID: 10733977)
1. Binding mechanisms of TATA box-binding proteins: DNA kinking is stabilized by specific hydrogen bonds.
Pardo L; Campillo M; Bosch D; Pastor N; Weinstein H
Biophys J; 2000 Apr; 78(4):1988-96. PubMed ID: 10733977
[TBL] [Abstract][Full Text] [Related]
2. Selective binding of the TATA box-binding protein to the TATA box-containing promoter: analysis of structural and energetic factors.
Pardo L; Pastor N; Weinstein H
Biophys J; 1998 Nov; 75(5):2411-21. PubMed ID: 9788936
[TBL] [Abstract][Full Text] [Related]
3. Does TATA matter? A structural exploration of the selectivity determinants in its complexes with TATA box-binding protein.
Pastor N; Pardo L; Weinstein H
Biophys J; 1997 Aug; 73(2):640-52. PubMed ID: 9251783
[TBL] [Abstract][Full Text] [Related]
4. Signals for TBP/TATA box recognition.
Bareket-Samish A; Cohen I; Haran TE
J Mol Biol; 2000 Jun; 299(4):965-77. PubMed ID: 10843851
[TBL] [Abstract][Full Text] [Related]
5. X-ray crystallographic studies of eukaryotic transcription initiation factors.
Burley SK
Philos Trans R Soc Lond B Biol Sci; 1996 Apr; 351(1339):483-9. PubMed ID: 8735270
[TBL] [Abstract][Full Text] [Related]
6. How proteins recognize the TATA box.
Juo ZS; Chiu TK; Leiberman PM; Baikalov I; Berk AJ; Dickerson RE
J Mol Biol; 1996 Aug; 261(2):239-54. PubMed ID: 8757291
[TBL] [Abstract][Full Text] [Related]
7. Affinity, stability and polarity of binding of the TATA binding protein governed by flexure at the TATA Box.
Grove A; Galeone A; Yu E; Mayol L; Geiduschek EP
J Mol Biol; 1998 Oct; 282(4):731-9. PubMed ID: 9743622
[TBL] [Abstract][Full Text] [Related]
8. Dynamic simulations of 13 TATA variants refine kinetic hypotheses of sequence/activity relationships.
Qian X; Strahs D; Schlick T
J Mol Biol; 2001 May; 308(4):681-703. PubMed ID: 11350169
[TBL] [Abstract][Full Text] [Related]
9. A detailed interpretation of OH radical footprints in a TBP-DNA complex reveals the role of dynamics in the mechanism of sequence-specific binding.
Pastor N; Weinstein H; Jamison E; Brenowitz M
J Mol Biol; 2000 Nov; 304(1):55-68. PubMed ID: 11071810
[TBL] [Abstract][Full Text] [Related]
10. CH/pi interactions in the crystal structure of TATA-box binding protein/DNA complexes.
Umezawa Y; Nishio M
Bioorg Med Chem; 2000 Nov; 8(11):2643-50. PubMed ID: 11092549
[TBL] [Abstract][Full Text] [Related]
11. Sequence-dependent dynamics of TATA-Box binding sites.
Flatters D; Lavery R
Biophys J; 1998 Jul; 75(1):372-81. PubMed ID: 9649394
[TBL] [Abstract][Full Text] [Related]
12. A regulated two-step mechanism of TBP binding to DNA: a solvent-exposed surface of TBP inhibits TATA box recognition.
Zhao X; Herr W
Cell; 2002 Mar; 108(5):615-27. PubMed ID: 11893333
[TBL] [Abstract][Full Text] [Related]
13. Model for binding of transcription factor TFIIB to the TBP-DNA complex.
Lee S; Hahn S
Nature; 1995 Aug; 376(6541):609-12. PubMed ID: 7637813
[TBL] [Abstract][Full Text] [Related]
14. Conformational properties of the TATA-box binding sequence of DNA.
Flatters D; Young M; Beveridge DL; Lavery R
J Biomol Struct Dyn; 1997 Jun; 14(6):757-65. PubMed ID: 9195344
[TBL] [Abstract][Full Text] [Related]
15. Dynamic interplay of TFIIA, TBP and TATA DNA.
Weideman CA; Netter RC; Benjamin LR; McAllister JJ; Schmiedekamp LA; Coleman RA; Pugh BF
J Mol Biol; 1997 Aug; 271(1):61-75. PubMed ID: 9300055
[TBL] [Abstract][Full Text] [Related]
16. DNA binding by TATA-box binding protein (TBP): a molecular dynamics computational study.
Miaskiewicz K; Ornstein RL
J Biomol Struct Dyn; 1996 Feb; 13(4):593-600. PubMed ID: 8906880
[TBL] [Abstract][Full Text] [Related]
17. TFIIA changes the conformation of the DNA in TBP/TATA complexes and increases their kinetic stability.
Hieb AR; Halsey WA; Betterton MD; Perkins TT; Kugel JF; Goodrich JA
J Mol Biol; 2007 Sep; 372(3):619-32. PubMed ID: 17681538
[TBL] [Abstract][Full Text] [Related]
18. Analysis of co-crystal structures to identify the stereochemical determinants of the orientation of TBP on the TATA box.
Suzuki M; Allen MD; Yagi N; Finch JT
Nucleic Acids Res; 1996 Jul; 24(14):2767-73. PubMed ID: 8759009
[TBL] [Abstract][Full Text] [Related]
19. DNA bending: the prevalence of kinkiness and the virtues of normality.
Dickerson RE
Nucleic Acids Res; 1998 Apr; 26(8):1906-26. PubMed ID: 9518483
[TBL] [Abstract][Full Text] [Related]
20. Deformations of promoter DNA bound to carcinogens help interpret effects on TATA-element structure and activity.
Zhang Q; Broyde S; Schlick T
Philos Trans A Math Phys Eng Sci; 2004 Jul; 362(1820):1479-96. PubMed ID: 15306462
[TBL] [Abstract][Full Text] [Related]
[Next] [New Search]
