110 related articles for article (PubMed ID: 10737762)
1. Predicting ligand-binding function in families of bacterial receptors.
Johnson JM; Church GM
Proc Natl Acad Sci U S A; 2000 Apr; 97(8):3965-70. PubMed ID: 10737762
[TBL] [Abstract][Full Text] [Related]
2. Hemoglobin-binding protein HgbA in the outer membrane of Actinobacillus pleuropneumoniae: homology modelling reveals regions of potential interactions with hemoglobin and heme.
Pawelek PD; Coulton JW
J Mol Graph Model; 2004 Dec; 23(3):211-21. PubMed ID: 15530817
[TBL] [Abstract][Full Text] [Related]
3. Expanding the nitrogen regulatory protein superfamily: Homology detection at below random sequence identity.
Kinch LN; Grishin NV
Proteins; 2002 Jul; 48(1):75-84. PubMed ID: 12012339
[TBL] [Abstract][Full Text] [Related]
4. Homology between O-linked GlcNAc transferases and proteins of the glycogen phosphorylase superfamily.
Wrabl JO; Grishin NV
J Mol Biol; 2001 Nov; 314(3):365-74. PubMed ID: 11846551
[TBL] [Abstract][Full Text] [Related]
5. BOF: a novel family of bacterial OB-fold proteins.
Ginalski K; Kinch L; Rychlewski L; Grishin NV
FEBS Lett; 2004 Jun; 567(2-3):297-301. PubMed ID: 15178340
[TBL] [Abstract][Full Text] [Related]
6. Structural insight into the specific interaction between murine SHPS-1/SIRP alpha and its ligand CD47.
Nakaishi A; Hirose M; Yoshimura M; Oneyama C; Saito K; Kuki N; Matsuda M; Honma N; Ohnishi H; Matozaki T; Okada M; Nakagawa A
J Mol Biol; 2008 Jan; 375(3):650-60. PubMed ID: 18045614
[TBL] [Abstract][Full Text] [Related]
7. Prediction of the structure of a receptor-protein complex using a binary docking method.
Stoddard BL; Koshland DE
Nature; 1992 Aug; 358(6389):774-6. PubMed ID: 1324436
[TBL] [Abstract][Full Text] [Related]
8. Crystal structure of a glutamate/aspartate binding protein complexed with a glutamate molecule: structural basis of ligand specificity at atomic resolution.
Hu Y; Fan CP; Fu G; Zhu D; Jin Q; Wang DC
J Mol Biol; 2008 Sep; 382(1):99-111. PubMed ID: 18640128
[TBL] [Abstract][Full Text] [Related]
9. Folding and binding integrity of variants of a prototype ligand-binding module from the LDL receptor possessing multiple alanine substitutions.
Abdul-Aziz D; Fisher C; Beglova N; Blacklow SC
Biochemistry; 2005 Apr; 44(13):5075-85. PubMed ID: 15794645
[TBL] [Abstract][Full Text] [Related]
10. Detection of 3D atomic similarities and their use in the discrimination of small molecule protein-binding sites.
Najmanovich R; Kurbatova N; Thornton J
Bioinformatics; 2008 Aug; 24(16):i105-11. PubMed ID: 18689810
[TBL] [Abstract][Full Text] [Related]
11. Binding site structure of one LRP-RAP complex: implications for a common ligand-receptor binding motif.
Jensen GA; Andersen OM; Bonvin AM; Bjerrum-Bohr I; Etzerodt M; Thøgersen HC; O'Shea C; Poulsen FM; Kragelund BB
J Mol Biol; 2006 Sep; 362(4):700-16. PubMed ID: 16938309
[TBL] [Abstract][Full Text] [Related]
12. Sequence and hydropathy profile analysis of two classes of secondary transporters.
Lolkema JS; Slotboom DJ
Mol Membr Biol; 2005; 22(3):177-89. PubMed ID: 16096261
[TBL] [Abstract][Full Text] [Related]
13. Structural classification of thioredoxin-like fold proteins.
Qi Y; Grishin NV
Proteins; 2005 Feb; 58(2):376-88. PubMed ID: 15558583
[TBL] [Abstract][Full Text] [Related]
14. An integrated approach to the analysis and modeling of protein sequences and structures. III. A comparative study of sequence conservation in protein structural families using multiple structural alignments.
Yang AS; Honig B
J Mol Biol; 2000 Aug; 301(3):691-711. PubMed ID: 10966778
[TBL] [Abstract][Full Text] [Related]
15. Structure-based mechanism of ligand binding for periplasmic solute-binding protein of the Bug family.
Herrou J; Bompard C; Antoine R; Leroy A; Rucktooa P; Hot D; Huvent I; Locht C; Villeret V; Jacob-Dubuisson F
J Mol Biol; 2007 Nov; 373(4):954-64. PubMed ID: 17870093
[TBL] [Abstract][Full Text] [Related]
16. Comprehensive structural classification of ligand-binding motifs in proteins.
Kinjo AR; Nakamura H
Structure; 2009 Feb; 17(2):234-46. PubMed ID: 19217394
[TBL] [Abstract][Full Text] [Related]
17. Conservation and variation in superantigen structure and activity highlighted by the three-dimensional structures of two new superantigens from Streptococcus pyogenes.
Arcus VL; Proft T; Sigrell JA; Baker HM; Fraser JD; Baker EN
J Mol Biol; 2000 May; 299(1):157-68. PubMed ID: 10860729
[TBL] [Abstract][Full Text] [Related]
18. X-ray structure of glucose/galactose receptor from Salmonella typhimurium in complex with the physiological ligand, (2R)-glyceryl-beta-D-galactopyranoside.
Sooriyaarachchi S; Ubhayasekera W; Boos W; Mowbray SL
FEBS J; 2009 Apr; 276(7):2116-24. PubMed ID: 19292879
[TBL] [Abstract][Full Text] [Related]
19. Homology modelling of transferrin-binding protein A from Neisseria meningitidis.
Oakhill JS; Sutton BJ; Gorringe AR; Evans RW
Protein Eng Des Sel; 2005 May; 18(5):221-8. PubMed ID: 15820975
[TBL] [Abstract][Full Text] [Related]
20. Molecular modeling study of the editing active site of Escherichia coli leucyl-tRNA synthetase: two amino acid binding sites in the editing domain.
Lee KW; Briggs JM
Proteins; 2004 Mar; 54(4):693-704. PubMed ID: 14997565
[TBL] [Abstract][Full Text] [Related]
[Next] [New Search]