These tools will no longer be maintained as of December 31, 2024. Archived website can be found here. PubMed4Hh GitHub repository can be found here. Contact NLM Customer Service if you have questions.


BIOMARKERS

Molecular Biopsy of Human Tumors

- a resource for Precision Medicine *

1354 related articles for article (PubMed ID: 10742046)

  • 21. Exploring the relationship between sequence similarity and accurate phylogenetic trees.
    Cantarel BL; Morrison HG; Pearson W
    Mol Biol Evol; 2006 Nov; 23(11):2090-100. PubMed ID: 16891377
    [TBL] [Abstract][Full Text] [Related]  

  • 22. A symmetric-iterated multiple alignment of protein sequences.
    Brocchieri L; Karlin S
    J Mol Biol; 1998 Feb; 276(1):249-64. PubMed ID: 9514731
    [TBL] [Abstract][Full Text] [Related]  

  • 23. Comparison of five methods for finding conserved sequences in multiple alignments of gene regulatory regions.
    Stojanovic N; Florea L; Riemer C; Gumucio D; Slightom J; Goodman M; Miller W; Hardison R
    Nucleic Acids Res; 1999 Oct; 27(19):3899-910. PubMed ID: 10481030
    [TBL] [Abstract][Full Text] [Related]  

  • 24. PASS2: an automated database of protein alignments organised as structural superfamilies.
    Bhaduri A; Pugalenthi G; Sowdhamini R
    BMC Bioinformatics; 2004 Apr; 5():35. PubMed ID: 15059245
    [TBL] [Abstract][Full Text] [Related]  

  • 25. Use of a database of structural alignments and phylogenetic trees in investigating the relationship between sequence and structural variability among homologous proteins.
    Balaji S; Srinivasan N
    Protein Eng; 2001 Apr; 14(4):219-26. PubMed ID: 11391013
    [TBL] [Abstract][Full Text] [Related]  

  • 26. LumberJack: a heuristic tool for sequence alignment exploration and phylogenetic inference.
    Lawrence CJ; Zmasek CM; Dawe RK; Malmberg RL
    Bioinformatics; 2004 Aug; 20(12):1977-9. PubMed ID: 15044241
    [TBL] [Abstract][Full Text] [Related]  

  • 27. Phylogenomics of eukaryotes: impact of missing data on large alignments.
    Philippe H; Snell EA; Bapteste E; Lopez P; Holland PW; Casane D
    Mol Biol Evol; 2004 Sep; 21(9):1740-52. PubMed ID: 15175415
    [TBL] [Abstract][Full Text] [Related]  

  • 28. Evolution of aminoacyl-tRNA synthetases--analysis of unique domain architectures and phylogenetic trees reveals a complex history of horizontal gene transfer events.
    Wolf YI; Aravind L; Grishin NV; Koonin EV
    Genome Res; 1999 Aug; 9(8):689-710. PubMed ID: 10447505
    [TBL] [Abstract][Full Text] [Related]  

  • 29. MAVID multiple alignment server.
    Bray N; Pachter L
    Nucleic Acids Res; 2003 Jul; 31(13):3525-6. PubMed ID: 12824358
    [TBL] [Abstract][Full Text] [Related]  

  • 30. Accuracy of structure-based sequence alignment of automatic methods.
    Kim C; Lee B
    BMC Bioinformatics; 2007 Sep; 8():355. PubMed ID: 17883866
    [TBL] [Abstract][Full Text] [Related]  

  • 31. Genome alignment, evolution of prokaryotic genome organization, and prediction of gene function using genomic context.
    Wolf YI; Rogozin IB; Kondrashov AS; Koonin EV
    Genome Res; 2001 Mar; 11(3):356-72. PubMed ID: 11230160
    [TBL] [Abstract][Full Text] [Related]  

  • 32. Multiple DNA and protein sequence alignment based on segment-to-segment comparison.
    Morgenstern B; Dress A; Werner T
    Proc Natl Acad Sci U S A; 1996 Oct; 93(22):12098-103. PubMed ID: 8901539
    [TBL] [Abstract][Full Text] [Related]  

  • 33. Multiple sequence alignment: in pursuit of homologous DNA positions.
    Kumar S; Filipski A
    Genome Res; 2007 Feb; 17(2):127-35. PubMed ID: 17272647
    [TBL] [Abstract][Full Text] [Related]  

  • 34. Mind the gaps: evidence of bias in estimates of multiple sequence alignments.
    Golubchik T; Wise MJ; Easteal S; Jermiin LS
    Mol Biol Evol; 2007 Nov; 24(11):2433-42. PubMed ID: 17709332
    [TBL] [Abstract][Full Text] [Related]  

  • 35. Pandit: a database of protein and associated nucleotide domains with inferred trees.
    Whelan S; de Bakker PI; Goldman N
    Bioinformatics; 2003 Aug; 19(12):1556-63. PubMed ID: 12912837
    [TBL] [Abstract][Full Text] [Related]  

  • 36. Evolutionary divergence plots of homologous proteins.
    Brouillet S; Risler JL; Hénaut A; Slonimski PP
    Biochimie; 1992 Jun; 74(6):571-80. PubMed ID: 1520737
    [TBL] [Abstract][Full Text] [Related]  

  • 37. A configuration space of homologous proteins conserving mutual information and allowing a phylogeny inference based on pair-wise Z-score probabilities.
    Bastien O; Ortet P; Roy S; Maréchal E
    BMC Bioinformatics; 2005 Mar; 6():49. PubMed ID: 15757521
    [TBL] [Abstract][Full Text] [Related]  

  • 38. Ancestral sequence alignment under optimal conditions.
    Hudek AK; Brown DG
    BMC Bioinformatics; 2005 Nov; 6():273. PubMed ID: 16293191
    [TBL] [Abstract][Full Text] [Related]  

  • 39. ClipKIT: A multiple sequence alignment trimming software for accurate phylogenomic inference.
    Steenwyk JL; Buida TJ; Li Y; Shen XX; Rokas A
    PLoS Biol; 2020 Dec; 18(12):e3001007. PubMed ID: 33264284
    [TBL] [Abstract][Full Text] [Related]  

  • 40. Using multiple interdependency to separate functional from phylogenetic correlations in protein alignments.
    Tillier ER; Lui TW
    Bioinformatics; 2003 Apr; 19(6):750-5. PubMed ID: 12691987
    [TBL] [Abstract][Full Text] [Related]  

    [Previous]   [Next]    [New Search]
    of 68.