These tools will no longer be maintained as of December 31, 2024. Archived website can be found here. PubMed4Hh GitHub repository can be found here. Contact NLM Customer Service if you have questions.


BIOMARKERS

Molecular Biopsy of Human Tumors

- a resource for Precision Medicine *

107 related articles for article (PubMed ID: 10816141)

  • 21. CATH-Gene3D: Generation of the Resource and Its Use in Obtaining Structural and Functional Annotations for Protein Sequences.
    Dawson NL; Sillitoe I; Lees JG; Lam SD; Orengo CA
    Methods Mol Biol; 2017; 1558():79-110. PubMed ID: 28150234
    [TBL] [Abstract][Full Text] [Related]  

  • 22. The CATH protein family database: a resource for structural and functional annotation of genomes.
    Orengo CA; Bray JE; Buchan DW; Harrison A; Lee D; Pearl FM; Sillitoe I; Todd AE; Thornton JM
    Proteomics; 2002 Jan; 2(1):11-21. PubMed ID: 11788987
    [TBL] [Abstract][Full Text] [Related]  

  • 23. CATH: expanding the horizons of structure-based functional annotations for genome sequences.
    Sillitoe I; Dawson N; Lewis TE; Das S; Lees JG; Ashford P; Tolulope A; Scholes HM; Senatorov I; Bujan A; Ceballos Rodriguez-Conde F; Dowling B; Thornton J; Orengo CA
    Nucleic Acids Res; 2019 Jan; 47(D1):D280-D284. PubMed ID: 30398663
    [TBL] [Abstract][Full Text] [Related]  

  • 24. Evolution of function in protein superfamilies, from a structural perspective.
    Todd AE; Orengo CA; Thornton JM
    J Mol Biol; 2001 Apr; 307(4):1113-43. PubMed ID: 11286560
    [TBL] [Abstract][Full Text] [Related]  

  • 25. Evaluation of PSI-BLAST alignment accuracy in comparison to structural alignments.
    Friedberg I; Kaplan T; Margalit H
    Protein Sci; 2000 Nov; 9(11):2278-84. PubMed ID: 11152139
    [TBL] [Abstract][Full Text] [Related]  

  • 26. PASS2: a semi-automated database of protein alignments organised as structural superfamilies.
    Mallika V; Bhaduri A; Sowdhamini R
    Nucleic Acids Res; 2002 Jan; 30(1):284-8. PubMed ID: 11752316
    [TBL] [Abstract][Full Text] [Related]  

  • 27. Functional classification of CATH superfamilies: a domain-based approach for protein function annotation.
    Das S; Lee D; Sillitoe I; Dawson NL; Lees JG; Orengo CA
    Bioinformatics; 2015 Nov; 31(21):3460-7. PubMed ID: 26139634
    [TBL] [Abstract][Full Text] [Related]  

  • 28. Assessing annotation transfer for genomics: quantifying the relations between protein sequence, structure and function through traditional and probabilistic scores.
    Wilson CA; Kreychman J; Gerstein M
    J Mol Biol; 2000 Mar; 297(1):233-49. PubMed ID: 10704319
    [TBL] [Abstract][Full Text] [Related]  

  • 29. eBLOCKs: enumerating conserved protein blocks to achieve maximal sensitivity and specificity.
    Su QJ; Lu L; Saxonov S; Brutlag DL
    Nucleic Acids Res; 2005 Jan; 33(Database issue):D178-82. PubMed ID: 15608172
    [TBL] [Abstract][Full Text] [Related]  

  • 30. Protein three-dimensional structural databases: domains, structurally aligned homologues and superfamilies.
    Sowdhamini R; Burke DF; Deane C; Huang JF; Mizuguchi K; Nagarajaram HA; Overington JP; Srinivasan N; Steward RE; Blundell TL
    Acta Crystallogr D Biol Crystallogr; 1998 Nov; 54(Pt 6 Pt 1):1168-77. PubMed ID: 10089493
    [TBL] [Abstract][Full Text] [Related]  

  • 31. The CATH classification revisited--architectures reviewed and new ways to characterize structural divergence in superfamilies.
    Cuff AL; Sillitoe I; Lewis T; Redfern OC; Garratt R; Thornton J; Orengo CA
    Nucleic Acids Res; 2009 Jan; 37(Database issue):D310-4. PubMed ID: 18996897
    [TBL] [Abstract][Full Text] [Related]  

  • 32. Exploiting protein structure data to explore the evolution of protein function and biological complexity.
    Marsden RL; Ranea JA; Sillero A; Redfern O; Yeats C; Maibaum M; Lee D; Addou S; Reeves GA; Dallman TJ; Orengo CA
    Philos Trans R Soc Lond B Biol Sci; 2006 Mar; 361(1467):425-40. PubMed ID: 16524831
    [TBL] [Abstract][Full Text] [Related]  

  • 33. Comparative modeling of CASP3 targets using PSI-BLAST and SCWRL.
    Dunbrack RL
    Proteins; 1999; Suppl 3():81-7. PubMed ID: 10526356
    [TBL] [Abstract][Full Text] [Related]  

  • 34. Gleaning non-trivial structural, functional and evolutionary information about proteins by iterative database searches.
    Aravind L; Koonin EV
    J Mol Biol; 1999 Apr; 287(5):1023-40. PubMed ID: 10222208
    [TBL] [Abstract][Full Text] [Related]  

  • 35. CATH--a hierarchic classification of protein domain structures.
    Orengo CA; Michie AD; Jones S; Jones DT; Swindells MB; Thornton JM
    Structure; 1997 Aug; 5(8):1093-108. PubMed ID: 9309224
    [TBL] [Abstract][Full Text] [Related]  

  • 36. The CATH database: an extended protein family resource for structural and functional genomics.
    Pearl FM; Bennett CF; Bray JE; Harrison AP; Martin N; Shepherd A; Sillitoe I; Thornton J; Orengo CA
    Nucleic Acids Res; 2003 Jan; 31(1):452-5. PubMed ID: 12520050
    [TBL] [Abstract][Full Text] [Related]  

  • 37. CATH: an expanded resource to predict protein function through structure and sequence.
    Dawson NL; Lewis TE; Das S; Lees JG; Lee D; Ashford P; Orengo CA; Sillitoe I
    Nucleic Acids Res; 2017 Jan; 45(D1):D289-D295. PubMed ID: 27899584
    [TBL] [Abstract][Full Text] [Related]  

  • 38. Assessing strategies for improved superfamily recognition.
    Sillitoe I; Dibley M; Bray J; Addou S; Orengo C
    Protein Sci; 2005 Jul; 14(7):1800-10. PubMed ID: 15937274
    [TBL] [Abstract][Full Text] [Related]  

  • 39. The enzymatic nature of an anonymous protein sequence cannot reliably be inferred from superfamily level structural information alone.
    Roche DB; Brüls T
    Protein Sci; 2015 May; 24(5):643-50. PubMed ID: 25559918
    [TBL] [Abstract][Full Text] [Related]  

  • 40. fastSCOP: a fast web server for recognizing protein structural domains and SCOP superfamilies.
    Tung CH; Yang JM
    Nucleic Acids Res; 2007 Jul; 35(Web Server issue):W438-43. PubMed ID: 17485476
    [TBL] [Abstract][Full Text] [Related]  

    [Previous]   [Next]    [New Search]
    of 6.