305 related articles for article (PubMed ID: 10833195)
41. Ancestral Sequence Reconstruction with Maximum Parsimony.
Herbst L; Fischer M
Bull Math Biol; 2017 Dec; 79(12):2865-2886. PubMed ID: 28993971
[TBL] [Abstract][Full Text] [Related]
42. Calculating Higher-Order Moments of Phylogenetic Stochastic Mapping Summaries in Linear Time.
Dhar A; Minin VN
J Comput Biol; 2017 May; 24(5):377-399. PubMed ID: 28177780
[TBL] [Abstract][Full Text] [Related]
43. A genetic algorithm for maximum-likelihood phylogeny inference using nucleotide sequence data.
Lewis PO
Mol Biol Evol; 1998 Mar; 15(3):277-83. PubMed ID: 9501494
[TBL] [Abstract][Full Text] [Related]
44. On the Accuracy of Ancestral Sequence Reconstruction for Ultrametric Trees with Parsimony.
Herbst L; Fischer M
Bull Math Biol; 2018 Apr; 80(4):864-879. PubMed ID: 29476399
[TBL] [Abstract][Full Text] [Related]
45. Ancestral sequence reconstruction in primate mitochondrial DNA: compositional bias and effect on functional inference.
Krishnan NM; Seligmann H; Stewart CB; De Koning AP; Pollock DD
Mol Biol Evol; 2004 Oct; 21(10):1871-83. PubMed ID: 15229290
[TBL] [Abstract][Full Text] [Related]
46. A configuration space of homologous proteins conserving mutual information and allowing a phylogeny inference based on pair-wise Z-score probabilities.
Bastien O; Ortet P; Roy S; Maréchal E
BMC Bioinformatics; 2005 Mar; 6():49. PubMed ID: 15757521
[TBL] [Abstract][Full Text] [Related]
47. Fast Dating Using Least-Squares Criteria and Algorithms.
To TH; Jung M; Lycett S; Gascuel O
Syst Biol; 2016 Jan; 65(1):82-97. PubMed ID: 26424727
[TBL] [Abstract][Full Text] [Related]
48. A novel method for estimating ancestral amino acid composition and its application to proteins of the Last Universal Ancestor.
Brooks DJ; Fresco JR; Singh M
Bioinformatics; 2004 Sep; 20(14):2251-7. PubMed ID: 15073018
[TBL] [Abstract][Full Text] [Related]
49. Quartet MaxCut: a fast algorithm for amalgamating quartet trees.
Snir S; Rao S
Mol Phylogenet Evol; 2012 Jan; 62(1):1-8. PubMed ID: 21762785
[TBL] [Abstract][Full Text] [Related]
50. From a phylogenetic tree to a reticulated network.
Makarenkov V; Legendre P
J Comput Biol; 2004; 11(1):195-212. PubMed ID: 15072696
[TBL] [Abstract][Full Text] [Related]
51. A structural EM algorithm for phylogenetic inference.
Friedman N; Ninio M; Pe'er I; Pupko T
J Comput Biol; 2002; 9(2):331-53. PubMed ID: 12015885
[TBL] [Abstract][Full Text] [Related]
52. Fast and accurate phylogenetic reconstruction from high-resolution whole-genome data and a novel robustness estimator.
Lin Y; Rajan V; Moret BM
J Comput Biol; 2011 Sep; 18(9):1131-9. PubMed ID: 21899420
[TBL] [Abstract][Full Text] [Related]
53. Robustness of ancestral sequence reconstruction to phylogenetic uncertainty.
Hanson-Smith V; Kolaczkowski B; Thornton JW
Mol Biol Evol; 2010 Sep; 27(9):1988-99. PubMed ID: 20368266
[TBL] [Abstract][Full Text] [Related]
54. Vestige: maximum likelihood phylogenetic footprinting.
Wakefield MJ; Maxwell P; Huttley GA
BMC Bioinformatics; 2005 May; 6():130. PubMed ID: 15921531
[TBL] [Abstract][Full Text] [Related]
55. apTreeshape: statistical analysis of phylogenetic tree shape.
Bortolussi N; Durand E; Blum M; François O
Bioinformatics; 2006 Feb; 22(3):363-4. PubMed ID: 16322049
[TBL] [Abstract][Full Text] [Related]
56. On the quality of tree-based protein classification.
Lazareva-Ulitsky B; Diemer K; Thomas PD
Bioinformatics; 2005 May; 21(9):1876-90. PubMed ID: 15647305
[TBL] [Abstract][Full Text] [Related]
57. Efficient likelihood computations with nonreversible models of evolution.
Boussau B; Gouy M
Syst Biol; 2006 Oct; 55(5):756-68. PubMed ID: 17060197
[TBL] [Abstract][Full Text] [Related]
58. RBT--a tool for building refined Buneman trees.
Besenbacher S; Mailund T; Westh-Nielsen L; Pedersen CN
Bioinformatics; 2005 Apr; 21(8):1711-2. PubMed ID: 15585529
[TBL] [Abstract][Full Text] [Related]
59. Likelihood analysis of phylogenetic networks using directed graphical models.
Strimmer K; Moulton V
Mol Biol Evol; 2000 Jun; 17(6):875-81. PubMed ID: 10833193
[TBL] [Abstract][Full Text] [Related]
60. Automated phylogenetic detection of recombination using a genetic algorithm.
Kosakovsky Pond SL; Posada D; Gravenor MB; Woelk CH; Frost SD
Mol Biol Evol; 2006 Oct; 23(10):1891-901. PubMed ID: 16818476
[TBL] [Abstract][Full Text] [Related]
[Previous] [Next] [New Search]
