175 related articles for article (PubMed ID: 10884351)
21. Structure of the potassium form of CGCGAATTCGCG: DNA deformation by electrostatic collapse around inorganic cations.
Shui X; Sines CC; McFail-Isom L; VanDerveer D; Williams LD
Biochemistry; 1998 Dec; 37(48):16877-87. PubMed ID: 9836580
[TBL] [Abstract][Full Text] [Related]
22. Crystallographic studies on damaged DNAs. I. An N(6)-methoxyadenine residue forms a Watson-Crick pair with a cytosine residue in a B-DNA duplex.
Chatake T; Ono A; Ueno Y; Matsuda A; Takénaka A
J Mol Biol; 1999 Dec; 294(5):1215-22. PubMed ID: 10600379
[TBL] [Abstract][Full Text] [Related]
23. A two-stranded template-based approach to G.(C-A) triad formation: designing novel structural elements into an existing DNA framework.
Kettani A; Basu G; Gorin A; Majumdar A; Skripkin E; Patel DJ
J Mol Biol; 2000 Aug; 301(1):129-46. PubMed ID: 10926497
[TBL] [Abstract][Full Text] [Related]
24. Isohelicity and phasing in drug--DNA sequence recognition: crystal structure of a tris(benzimidazole)--oligonucleotide complex.
Clark GR; Gray EJ; Neidle S; Li YH; Leupin W
Biochemistry; 1996 Oct; 35(43):13745-52. PubMed ID: 8901516
[TBL] [Abstract][Full Text] [Related]
25. C-H.O hydrogen bonds in minor groove of A-tracts in DNA double helices.
Ghosh A; Bansal M
J Mol Biol; 1999 Dec; 294(5):1149-58. PubMed ID: 10600373
[TBL] [Abstract][Full Text] [Related]
26. Influence of ions, hydration, and the transcriptional inhibitor P4N on the conformations of the Sp1 binding site.
Dohm JA; Hsu MH; Hwu JR; Huang RC; Moudrianakis EN; Lattman EE; Gittis AG
J Mol Biol; 2005 Jun; 349(4):731-44. PubMed ID: 15896803
[TBL] [Abstract][Full Text] [Related]
27. Interaction between the Z-type DNA duplex and 1,3-propanediamine: crystal structure of d(CACGTG)2 at 1.2 A resolution.
Narayana N; Shamala N; Ganesh KN; Viswamitra MA
Biochemistry; 2006 Jan; 45(4):1200-11. PubMed ID: 16430216
[TBL] [Abstract][Full Text] [Related]
28. Molecular dynamics simulation study of DNA dodecamer d(CGCGAATTCGCG) in solution: conformation and hydration.
Duan Y; Wilkosz P; Crowley M; Rosenberg JM
J Mol Biol; 1997 Oct; 272(4):553-72. PubMed ID: 9325112
[TBL] [Abstract][Full Text] [Related]
29. Base-pairing shift in the major groove of (CA)n tracts by B-DNA crystal structures.
Timsit Y; Vilbois E; Moras D
Nature; 1991 Nov; 354(6349):167-70. PubMed ID: 1944598
[TBL] [Abstract][Full Text] [Related]
30. A-form conformational motifs in ligand-bound DNA structures.
Lu XJ; Shakked Z; Olson WK
J Mol Biol; 2000 Jul; 300(4):819-40. PubMed ID: 10891271
[TBL] [Abstract][Full Text] [Related]
31. Water and ion binding around RNA and DNA (C,G) oligomers.
Auffinger P; Westhof E
J Mol Biol; 2000 Jul; 300(5):1113-31. PubMed ID: 10903858
[TBL] [Abstract][Full Text] [Related]
32. Structure of the d(CGCCCGCGGGCG) dodecamer: a kinked A-DNA molecule showing some B-DNA features.
Malinina L; Fernandez LG; Huynh-Dinh T; Subirana JA
J Mol Biol; 1999 Jan; 285(4):1679-90. PubMed ID: 9917405
[TBL] [Abstract][Full Text] [Related]
33. Free energy and structural pathways of base flipping in a DNA GCGC containing sequence.
Banavali NK; MacKerell AD
J Mol Biol; 2002 May; 319(1):141-60. PubMed ID: 12051942
[TBL] [Abstract][Full Text] [Related]
34. Indirect readout of DNA sequence at the primary-kink site in the CAP-DNA complex: DNA binding specificity based on energetics of DNA kinking.
Chen S; Vojtechovsky J; Parkinson GN; Ebright RH; Berman HM
J Mol Biol; 2001 Nov; 314(1):63-74. PubMed ID: 11724532
[TBL] [Abstract][Full Text] [Related]
35. X-ray structure of a DNA hairpin molecule.
Chattopadhyaya R; Ikuta S; Grzeskowiak K; Dickerson RE
Nature; 1988 Jul; 334(6178):175-9. PubMed ID: 3386757
[TBL] [Abstract][Full Text] [Related]
36. Unusual helical packing in crystals of DNA bearing a mutation hot spot.
Timsit Y; Westhof E; Fuchs RP; Moras D
Nature; 1989 Oct; 341(6241):459-62. PubMed ID: 2797169
[TBL] [Abstract][Full Text] [Related]
37. Crystal structures of the chromosomal proteins Sso7d/Sac7d bound to DNA containing T-G mismatched base-pairs.
Su S; Gao YG; Robinson H; Liaw YC; Edmondson SP; Shriver JW; Wang AH
J Mol Biol; 2000 Oct; 303(3):395-403. PubMed ID: 11031116
[TBL] [Abstract][Full Text] [Related]
38. Crystal structure of a continuous three-dimensional DNA lattice.
Paukstelis PJ; Nowakowski J; Birktoft JJ; Seeman NC
Chem Biol; 2004 Aug; 11(8):1119-26. PubMed ID: 15324813
[TBL] [Abstract][Full Text] [Related]
39. Netropsin interactions in the minor groove of d(GGCCAATTGG) studied by a combination of resolution enhancement and ab initio calculations.
Van Hecke K; Nam PC; Nguyen MT; Van Meervelt L
FEBS J; 2005 Jul; 272(14):3531-41. PubMed ID: 16008554
[TBL] [Abstract][Full Text] [Related]
40. Molecular dynamics simulation of the hydration shell of a B-DNA decamer reveals two main types of minor-groove hydration depending on groove width.
Chuprina VP; Heinemann U; Nurislamov AA; Zielenkiewicz P; Dickerson RE; Saenger W
Proc Natl Acad Sci U S A; 1991 Jan; 88(2):593-7. PubMed ID: 1988954
[TBL] [Abstract][Full Text] [Related]
[Previous] [Next] [New Search]
