These tools will no longer be maintained as of December 31, 2024. Archived website can be found here. PubMed4Hh GitHub repository can be found here. Contact NLM Customer Service if you have questions.


BIOMARKERS

Molecular Biopsy of Human Tumors

- a resource for Precision Medicine *

138 related articles for article (PubMed ID: 10890393)

  • 1. A Bayesian model for detecting past recombination events in DNA multiple alignments.
    McGuire G; Wright F; Prentice MJ
    J Comput Biol; 2000; 7(1-2):159-70. PubMed ID: 10890393
    [TBL] [Abstract][Full Text] [Related]  

  • 2. Detection of recombination in DNA multiple alignments with hidden Markov models.
    Husmeier D; Wright F
    J Comput Biol; 2001; 8(4):401-27. PubMed ID: 11571075
    [TBL] [Abstract][Full Text] [Related]  

  • 3. A graphical method for detecting recombination in phylogenetic data sets.
    McGuire G; Wright F; Prentice MJ
    Mol Biol Evol; 1997 Nov; 14(11):1125-31. PubMed ID: 9364770
    [TBL] [Abstract][Full Text] [Related]  

  • 4. Addressing the shortcomings of three recent Bayesian methods for detecting interspecific recombination in DNA sequence alignments.
    Husmeier D; Mantzaris AV
    Stat Appl Genet Mol Biol; 2008; 7(1):Article 34. PubMed ID: 19049490
    [TBL] [Abstract][Full Text] [Related]  

  • 5. Bayesian coestimation of phylogeny and sequence alignment.
    Lunter G; Miklós I; Drummond A; Jensen JL; Hein J
    BMC Bioinformatics; 2005 Apr; 6():83. PubMed ID: 15804354
    [TBL] [Abstract][Full Text] [Related]  

  • 6. Detecting recombination in 4-taxa DNA sequence alignments with Bayesian hidden Markov models and Markov chain Monte Carlo.
    Husmeier D; McGuire G
    Mol Biol Evol; 2003 Mar; 20(3):315-37. PubMed ID: 12644553
    [TBL] [Abstract][Full Text] [Related]  

  • 7. Detecting recombination with MCMC.
    Husmeier D; McGuire G
    Bioinformatics; 2002; 18 Suppl 1():S345-53. PubMed ID: 12169565
    [TBL] [Abstract][Full Text] [Related]  

  • 8. Probabilistic divergence measures for detecting interspecies recombination.
    Husmeier D; Wright F
    Bioinformatics; 2001; 17 Suppl 1():S123-31. PubMed ID: 11473001
    [TBL] [Abstract][Full Text] [Related]  

  • 9. Discriminating between rate heterogeneity and interspecific recombination in DNA sequence alignments with phylogenetic factorial hidden Markov models.
    Husmeier D
    Bioinformatics; 2005 Sep; 21 Suppl 2():ii166-72. PubMed ID: 16204097
    [TBL] [Abstract][Full Text] [Related]  

  • 10. Phylogenetic inference under recombination using Bayesian stochastic topology selection.
    Webb A; Hancock JM; Holmes CC
    Bioinformatics; 2009 Jan; 25(2):197-203. PubMed ID: 19028720
    [TBL] [Abstract][Full Text] [Related]  

  • 11. A heuristic Bayesian method for segmenting DNA sequence alignments and detecting evidence for recombination and gene conversion.
    Kedzierska A; Husmeier D
    Stat Appl Genet Mol Biol; 2006; 5():Article27. PubMed ID: 17140392
    [TBL] [Abstract][Full Text] [Related]  

  • 12. Are you my mother? Bayesian phylogenetic inference of recombination among putative parental strains.
    Sinsheimer JS; Suchard MA; Dorman KS; Fang F; Weiss RE
    Appl Bioinformatics; 2003; 2(3):131-44. PubMed ID: 15130798
    [TBL] [Abstract][Full Text] [Related]  

  • 13. Automated phylogenetic detection of recombination using a genetic algorithm.
    Kosakovsky Pond SL; Posada D; Gravenor MB; Woelk CH; Frost SD
    Mol Biol Evol; 2006 Oct; 23(10):1891-901. PubMed ID: 16818476
    [TBL] [Abstract][Full Text] [Related]  

  • 14. Joint Bayesian estimation of alignment and phylogeny.
    Redelings BD; Suchard MA
    Syst Biol; 2005 Jun; 54(3):401-18. PubMed ID: 16012107
    [TBL] [Abstract][Full Text] [Related]  

  • 15. Statistical alignment with a sequence evolution model allowing rate heterogeneity along the sequence.
    Arribas-Gil A; Metzler D; Plouhinec JL
    IEEE/ACM Trans Comput Biol Bioinform; 2009; 6(2):281-95. PubMed ID: 19407352
    [TBL] [Abstract][Full Text] [Related]  

  • 16. Sequence alignments and pair hidden Markov models using evolutionary history.
    Knudsen B; Miyamoto MM
    J Mol Biol; 2003 Oct; 333(2):453-60. PubMed ID: 14529629
    [TBL] [Abstract][Full Text] [Related]  

  • 17. Empirical and hierarchical Bayesian estimation of ancestral states.
    Huelsenbeck JP; Bollback JP
    Syst Biol; 2001 Jun; 50(3):351-66. PubMed ID: 12116580
    [TBL] [Abstract][Full Text] [Related]  

  • 18. SlidingBayes: exploring recombination using a sliding window approach based on Bayesian phylogenetic inference.
    Paraskevis D; Deforche K; Lemey P; Magiorkinis G; Hatzakis A; Vandamme AM
    Bioinformatics; 2005 Apr; 21(7):1274-5. PubMed ID: 15546940
    [TBL] [Abstract][Full Text] [Related]  

  • 19. Parameter estimation in multiple-hidden i.i.d. models from biological multiple alignment.
    Arribas-Gil A
    Stat Appl Genet Mol Biol; 2010; 9():Article 10. PubMed ID: 20196745
    [TBL] [Abstract][Full Text] [Related]  

  • 20. An examination of the monophyly of morning glory taxa using Bayesian phylogenetic inference.
    Miller RE; Buckley TR; Manos PS
    Syst Biol; 2002 Oct; 51(5):740-53. PubMed ID: 12396588
    [TBL] [Abstract][Full Text] [Related]  

    [Next]    [New Search]
    of 7.