BIOMARKERS

Molecular Biopsy of Human Tumors

- a resource for Precision Medicine *

3693 related articles for article (PubMed ID: 10903873)

  • 41. An analysis of side chain interactions and pair correlations within antiparallel beta-sheets: the differences between backbone hydrogen-bonded and non-hydrogen-bonded residue pairs.
    Wouters MA; Curmi PM
    Proteins; 1995 Jun; 22(2):119-31. PubMed ID: 7567960
    [TBL] [Abstract][Full Text] [Related]  

  • 42. Tryptophan side chain electrostatic interactions determine edge-to-face vs parallel-displaced tryptophan side chain geometries in the designed beta-hairpin "trpzip2".
    Guvench O; Brooks CL
    J Am Chem Soc; 2005 Apr; 127(13):4668-74. PubMed ID: 15796532
    [TBL] [Abstract][Full Text] [Related]  

  • 43. Alpha helix capping in synthetic model peptides by reciprocal side chain-main chain interactions: evidence for an N terminal "capping box".
    Zhou HX; Lyu P; Wemmer DE; Kallenbach NR
    Proteins; 1994 Jan; 18(1):1-7. PubMed ID: 8146119
    [TBL] [Abstract][Full Text] [Related]  

  • 44. Solvent dependence of PII conformation in model alanine peptides.
    Liu Z; Chen K; Ng A; Shi Z; Woody RW; Kallenbach NR
    J Am Chem Soc; 2004 Nov; 126(46):15141-50. PubMed ID: 15548011
    [TBL] [Abstract][Full Text] [Related]  

  • 45. Free energy surfaces of beta-hairpin and alpha-helical peptides generated by replica exchange molecular dynamics with the AGBNP implicit solvent model.
    Felts AK; Harano Y; Gallicchio E; Levy RM
    Proteins; 2004 Aug; 56(2):310-21. PubMed ID: 15211514
    [TBL] [Abstract][Full Text] [Related]  

  • 46. Helix-capping interaction in lambda Cro protein: a free energy simulation analysis.
    Tidor B
    Proteins; 1994 Aug; 19(4):310-23. PubMed ID: 7984627
    [TBL] [Abstract][Full Text] [Related]  

  • 47. Rotamers: to be or not to be? An analysis of amino acid side-chain conformations in globular proteins.
    Schrauber H; Eisenhaber F; Argos P
    J Mol Biol; 1993 Mar; 230(2):592-612. PubMed ID: 8464066
    [TBL] [Abstract][Full Text] [Related]  

  • 48. Elucidating the folding problem of alpha-helices: local motifs, long-range electrostatics, ionic-strength dependence and prediction of NMR parameters.
    Lacroix E; Viguera AR; Serrano L
    J Mol Biol; 1998 Nov; 284(1):173-91. PubMed ID: 9811549
    [TBL] [Abstract][Full Text] [Related]  

  • 49. Conformational characteristics of peptides and unanticipated results from crystal structure analyses.
    Karle IL
    Biopolymers; 1989 Jan; 28(1):1-14. PubMed ID: 2720096
    [TBL] [Abstract][Full Text] [Related]  

  • 50. Molecular dynamics study of the solvation of an alpha-helical transmembrane peptide by DMSO.
    Duarte AM; van Mierlo CP; Hemminga MA
    J Phys Chem B; 2008 Jul; 112(29):8664-71. PubMed ID: 18582096
    [TBL] [Abstract][Full Text] [Related]  

  • 51. Single-site mutation and secondary structure stability: an isodesmic reaction approach. The case of unnatural amino acid mutagenesis Ala-->Lac.
    Cieplak AS; Sürmeli NB
    J Org Chem; 2004 May; 69(10):3250-61. PubMed ID: 15132529
    [TBL] [Abstract][Full Text] [Related]  

  • 52. Free energy determinants of secondary structure formation: III. beta-turns and their role in protein folding.
    Yang AS; Hitz B; Honig B
    J Mol Biol; 1996 Jun; 259(4):873-82. PubMed ID: 8683589
    [TBL] [Abstract][Full Text] [Related]  

  • 53. Estimating protein-ligand binding free energy: atomic solvation parameters for partition coefficient and solvation free energy calculation.
    Pei J; Wang Q; Zhou J; Lai L
    Proteins; 2004 Dec; 57(4):651-64. PubMed ID: 15390269
    [TBL] [Abstract][Full Text] [Related]  

  • 54. Examining methods for calculations of binding free energies: LRA, LIE, PDLD-LRA, and PDLD/S-LRA calculations of ligands binding to an HIV protease.
    Sham YY; Chu ZT; Tao H; Warshel A
    Proteins; 2000 Jun; 39(4):393-407. PubMed ID: 10813821
    [TBL] [Abstract][Full Text] [Related]  

  • 55. Universal solvation model based on solute electron density and on a continuum model of the solvent defined by the bulk dielectric constant and atomic surface tensions.
    Marenich AV; Cramer CJ; Truhlar DG
    J Phys Chem B; 2009 May; 113(18):6378-96. PubMed ID: 19366259
    [TBL] [Abstract][Full Text] [Related]  

  • 56. Theoretical analysis of secondary structures of beta-peptides.
    Wu YD; Han W; Wang DP; Gao Y; Zhao YL
    Acc Chem Res; 2008 Oct; 41(10):1418-27. PubMed ID: 18828608
    [TBL] [Abstract][Full Text] [Related]  

  • 57. Infrared and vibrational CD spectra of partially solvated alpha-helices: DFT-based simulations with explicit solvent.
    Turner DR; Kubelka J
    J Phys Chem B; 2007 Feb; 111(7):1834-45. PubMed ID: 17256894
    [TBL] [Abstract][Full Text] [Related]  

  • 58. H-bonding cooperativity and energetics of alpha-helix formation of five 17-amino acid peptides.
    Wieczorek R; Dannenberg JJ
    J Am Chem Soc; 2003 Jul; 125(27):8124-9. PubMed ID: 12837081
    [TBL] [Abstract][Full Text] [Related]  

  • 59. Salt bridge stability in monomeric proteins.
    Kumar S; Nussinov R
    J Mol Biol; 1999 Nov; 293(5):1241-55. PubMed ID: 10547298
    [TBL] [Abstract][Full Text] [Related]  

  • 60. The world of beta- and gamma-peptides comprised of homologated proteinogenic amino acids and other components.
    Seebach D; Beck AK; Bierbaum DJ
    Chem Biodivers; 2004 Aug; 1(8):1111-239. PubMed ID: 17191902
    [TBL] [Abstract][Full Text] [Related]  

    [Previous]   [Next]    [New Search]
    of 185.