These tools will no longer be maintained as of December 31, 2024. Archived website can be found here. PubMed4Hh GitHub repository can be found here. Contact NLM Customer Service if you have questions.


BIOMARKERS

Molecular Biopsy of Human Tumors

- a resource for Precision Medicine *

276 related articles for article (PubMed ID: 10975579)

  • 41. Statistical significance of hierarchical multi-body potentials based on Delaunay tessellation and their application in sequence-structure alignment.
    Munson PJ; Singh RK
    Protein Sci; 1997 Jul; 6(7):1467-81. PubMed ID: 9232648
    [TBL] [Abstract][Full Text] [Related]  

  • 42. Environment-specific amino acid substitution tables: tertiary templates and prediction of protein folds.
    Overington J; Donnelly D; Johnson MS; Sali A; Blundell TL
    Protein Sci; 1992 Feb; 1(2):216-26. PubMed ID: 1304904
    [TBL] [Abstract][Full Text] [Related]  

  • 43. The 1.7 A crystal structure of BPI: a study of how two dissimilar amino acid sequences can adopt the same fold.
    Kleiger G; Beamer LJ; Grothe R; Mallick P; Eisenberg D
    J Mol Biol; 2000 Jun; 299(4):1019-34. PubMed ID: 10843855
    [TBL] [Abstract][Full Text] [Related]  

  • 44. A structural basis for sequence comparisons. An evaluation of scoring methodologies.
    Johnson MS; Overington JP
    J Mol Biol; 1993 Oct; 233(4):716-38. PubMed ID: 8411177
    [TBL] [Abstract][Full Text] [Related]  

  • 45. Automated search of natively folded protein fragments for high-throughput structure determination in structural genomics.
    Kuroda Y; Tani K; Matsuo Y; Yokoyama S
    Protein Sci; 2000 Dec; 9(12):2313-21. PubMed ID: 11206052
    [TBL] [Abstract][Full Text] [Related]  

  • 46. Multiple mapping method: a novel approach to the sequence-to-structure alignment problem in comparative protein structure modeling.
    Rai BK; Fiser A
    Proteins; 2006 May; 63(3):644-61. PubMed ID: 16437570
    [TBL] [Abstract][Full Text] [Related]  

  • 47. Large-scale comparison of protein sequence alignment algorithms with structure alignments.
    Sauder JM; Arthur JW; Dunbrack RL
    Proteins; 2000 Jul; 40(1):6-22. PubMed ID: 10813826
    [TBL] [Abstract][Full Text] [Related]  

  • 48. PFRES: protein fold classification by using evolutionary information and predicted secondary structure.
    Chen K; Kurgan L
    Bioinformatics; 2007 Nov; 23(21):2843-50. PubMed ID: 17942446
    [TBL] [Abstract][Full Text] [Related]  

  • 49. A neural network method for prediction of beta-turn types in proteins using evolutionary information.
    Kaur H; Raghava GP
    Bioinformatics; 2004 Nov; 20(16):2751-8. PubMed ID: 15145798
    [TBL] [Abstract][Full Text] [Related]  

  • 50. Empirical models for substitution in ribosomal RNA.
    Smith AD; Lui TW; Tillier ER
    Mol Biol Evol; 2004 Mar; 21(3):419-27. PubMed ID: 14660689
    [TBL] [Abstract][Full Text] [Related]  

  • 51. Blast sampling for structural and functional analyses.
    Friedrich A; Ripp R; Garnier N; Bettler E; Deléage G; Poch O; Moulinier L
    BMC Bioinformatics; 2007 Feb; 8():62. PubMed ID: 17319945
    [TBL] [Abstract][Full Text] [Related]  

  • 52. EvDTree: structure-dependent substitution profiles based on decision tree classification of 3D environments.
    Gelly JC; Chiche L; Gracy J
    BMC Bioinformatics; 2005 Jan; 6():4. PubMed ID: 15638949
    [TBL] [Abstract][Full Text] [Related]  

  • 53. Protein fold recognition using sequence-derived predictions.
    Fischer D; Eisenberg D
    Protein Sci; 1996 May; 5(5):947-55. PubMed ID: 8732766
    [TBL] [Abstract][Full Text] [Related]  

  • 54. Defining a similarity threshold for a functional protein sequence pattern: the signal peptide cleavage site.
    Nielsen H; Engelbrecht J; von Heijne G; Brunak S
    Proteins; 1996 Feb; 24(2):165-77. PubMed ID: 8820484
    [TBL] [Abstract][Full Text] [Related]  

  • 55. Frequency of gaps observed in a structurally aligned protein pair database suggests a simple gap penalty function.
    Goonesekere NC; Lee B
    Nucleic Acids Res; 2004; 32(9):2838-43. PubMed ID: 15155852
    [TBL] [Abstract][Full Text] [Related]  

  • 56. Contact pair dynamics during folding of two small proteins: chicken villin head piece and the Alzheimer protein beta-amyloid.
    Mukherjee A; Bagchi B
    J Chem Phys; 2004 Jan; 120(3):1602-12. PubMed ID: 15268287
    [TBL] [Abstract][Full Text] [Related]  

  • 57. A novel fold recognition method using composite predicted secondary structures.
    An Y; Friesner RA
    Proteins; 2002 Aug; 48(2):352-66. PubMed ID: 12112702
    [TBL] [Abstract][Full Text] [Related]  

  • 58. Protein structure prediction of CASP5 comparative modeling and fold recognition targets using consensus alignment approach and 3D assessment.
    Ginalski K; Rychlewski L
    Proteins; 2003; 53 Suppl 6():410-7. PubMed ID: 14579329
    [TBL] [Abstract][Full Text] [Related]  

  • 59. Performance evaluation of amino acid substitution matrices.
    Henikoff S; Henikoff JG
    Proteins; 1993 Sep; 17(1):49-61. PubMed ID: 8234244
    [TBL] [Abstract][Full Text] [Related]  

  • 60. A simple and fast approach to prediction of protein secondary structure from multiply aligned sequences with accuracy above 70%.
    Mehta PK; Heringa J; Argos P
    Protein Sci; 1995 Dec; 4(12):2517-25. PubMed ID: 8580842
    [TBL] [Abstract][Full Text] [Related]  

    [Previous]   [Next]    [New Search]
    of 14.