BIOMARKERS

Molecular Biopsy of Human Tumors

- a resource for Precision Medicine *

208 related articles for article (PubMed ID: 11099379)

  • 1. BII nucleotides in the B and C forms of natural-sequence polymeric DNA: A new model for the C form of DNA.
    van Dam L; Levitt MH
    J Mol Biol; 2000 Dec; 304(4):541-61. PubMed ID: 11099379
    [TBL] [Abstract][Full Text] [Related]  

  • 2. Solution structure of the CpG containing d(CTTCGAAG)2 oligonucleotide: NMR data and energy calculations are compatible with a BI/BII equilibrium at CpG.
    Lefebvre A; Mauffret O; Lescot E; Hartmann B; Fermandjian S
    Biochemistry; 1996 Sep; 35(38):12560-9. PubMed ID: 8823193
    [TBL] [Abstract][Full Text] [Related]  

  • 3. DNA fine structure and dynamics in crystals and in solution: the impact of BI/BII backbone conformations.
    Djuranovic D; Hartmann B
    Biopolymers; 2004 Feb; 73(3):356-68. PubMed ID: 14755572
    [TBL] [Abstract][Full Text] [Related]  

  • 4. Sequence preference for BI/BII conformations in DNA: MD and crystal structure data analysis.
    Madhumalar A; Bansal M
    J Biomol Struct Dyn; 2005 Aug; 23(1):13-27. PubMed ID: 15918673
    [TBL] [Abstract][Full Text] [Related]  

  • 5. Solution structure of a non-palindromic 16 base-pair DNA related to the HIV-1 kappa B site: evidence for BI-BII equilibrium inducing a global dynamic curvature of the duplex.
    Tisné C; Hantz E; Hartmann B; Delepierre M
    J Mol Biol; 1998 May; 279(1):127-42. PubMed ID: 9636705
    [TBL] [Abstract][Full Text] [Related]  

  • 6. Quantification of DNA BI/BII backbone states in solution. Implications for DNA overall structure and recognition.
    Heddi B; Foloppe N; Bouchemal N; Hantz E; Hartmann B
    J Am Chem Soc; 2006 Jul; 128(28):9170-7. PubMed ID: 16834390
    [TBL] [Abstract][Full Text] [Related]  

  • 7. NMR evidence for mechanical coupling of phosphate B(I)-B(II) transitions with deoxyribose conformational exchange in DNA.
    Isaacs RJ; Spielmann HP
    J Mol Biol; 2001 Aug; 311(1):149-60. PubMed ID: 11469864
    [TBL] [Abstract][Full Text] [Related]  

  • 8. Unexpected BII conformer substate population in unoriented hydrated films of the d(CGCGAATTCGCG)2 dodecamer and of native B-DNA from salmon testes.
    Pichler A; Rüdisser S; Mitterböck M; Huber CG; Winger RH; Liedl KR; Hallbrucker A; Mayer E
    Biophys J; 1999 Jul; 77(1):398-409. PubMed ID: 10388766
    [TBL] [Abstract][Full Text] [Related]  

  • 9. Protein-DNA hydrophobic recognition in the minor groove is facilitated by sugar switching.
    Tolstorukov MY; Jernigan RL; Zhurkin VB
    J Mol Biol; 2004 Mar; 337(1):65-76. PubMed ID: 15001352
    [TBL] [Abstract][Full Text] [Related]  

  • 10. Conformational flexibility of B-DNA at 0.74 A resolution: d(CCAGTACTGG)(2).
    Kielkopf CL; Ding S; Kuhn P; Rees DC
    J Mol Biol; 2000 Feb; 296(3):787-801. PubMed ID: 10677281
    [TBL] [Abstract][Full Text] [Related]  

  • 11. DNA structure: what's in charge?
    McConnell KJ; Beveridge DL
    J Mol Biol; 2000 Dec; 304(5):803-20. PubMed ID: 11124028
    [TBL] [Abstract][Full Text] [Related]  

  • 12. A unified model for the origin of DNA sequence-directed curvature.
    Hud NV; Plavec J
    Biopolymers; 2003 May; 69(1):144-58. PubMed ID: 12717729
    [TBL] [Abstract][Full Text] [Related]  

  • 13. M.TaqI facilitates the base flipping via an unusual DNA backbone conformation.
    Wibowo FR; Rauch C; Trieb M; Liedl KR
    Biopolymers; 2005 Oct; 79(3):128-38. PubMed ID: 16047360
    [TBL] [Abstract][Full Text] [Related]  

  • 14. The extended and eccentric E-DNA structure induced by cytosine methylation or bromination.
    Vargason JM; Eichman BF; Ho PS
    Nat Struct Biol; 2000 Sep; 7(9):758-61. PubMed ID: 10966645
    [TBL] [Abstract][Full Text] [Related]  

  • 15. [Investigation of the structure of magnesium and lithium salts of T2 phage DNA by the method of x-ray diffraction. The possible mechanisms of the participation of cations in the structural transformation of double-stranded DNA].
    Skuratovskii IIa; Bartenev VN
    Mol Biol (Mosk); 1978; 12(6):1359-76. PubMed ID: 745608
    [TBL] [Abstract][Full Text] [Related]  

  • 16. NF-kappa B binding mechanism: a nuclear magnetic resonance and modeling study of a GGG --> CTC mutation.
    Tisné C; Hartmann B; Delepierre M
    Biochemistry; 1999 Mar; 38(13):3883-94. PubMed ID: 10194299
    [TBL] [Abstract][Full Text] [Related]  

  • 17. [Local mobility of the DNA double helix. Comparison of conformational analysis with experiments].
    Zhurkin VB
    Mol Biol (Mosk); 1983; 17(3):622-38. PubMed ID: 6877234
    [TBL] [Abstract][Full Text] [Related]  

  • 18. Water-DNA interactions as studied by X-ray and neutron fibre diffraction.
    Fuller W; Forsyth T; Mahendrasingam A
    Philos Trans R Soc Lond B Biol Sci; 2004 Aug; 359(1448):1237-47; discussion 1247-8. PubMed ID: 15306379
    [TBL] [Abstract][Full Text] [Related]  

  • 19. Dynamics of B-DNA on the microsecond time scale.
    Pérez A; Luque FJ; Orozco M
    J Am Chem Soc; 2007 Nov; 129(47):14739-45. PubMed ID: 17985896
    [TBL] [Abstract][Full Text] [Related]  

  • 20. Crystal structure of a junction between B-DNA and Z-DNA reveals two extruded bases.
    Ha SC; Lowenhaupt K; Rich A; Kim YG; Kim KK
    Nature; 2005 Oct; 437(7062):1183-6. PubMed ID: 16237447
    [TBL] [Abstract][Full Text] [Related]  

    [Next]    [New Search]
    of 11.