BIOMARKERS

Molecular Biopsy of Human Tumors

- a resource for Precision Medicine *

124 related articles for article (PubMed ID: 11125088)

  • 1. PseudoBase: structural information on RNA pseudoknots.
    van Batenburg FH; Gultyaev AP; Pleij CW
    Nucleic Acids Res; 2001 Jan; 29(1):194-5. PubMed ID: 11125088
    [TBL] [Abstract][Full Text] [Related]  

  • 2. PseudoBase: a database with RNA pseudoknots.
    van Batenburg FH; Gultyaev AP; Pleij CW; Ng J; Oliehoek J
    Nucleic Acids Res; 2000 Jan; 28(1):201-4. PubMed ID: 10592225
    [TBL] [Abstract][Full Text] [Related]  

  • 3. PseudoBase++: an extension of PseudoBase for easy searching, formatting and visualization of pseudoknots.
    Taufer M; Licon A; Araiza R; Mireles D; van Batenburg FH; Gultyaev AP; Leung MY
    Nucleic Acids Res; 2009 Jan; 37(Database issue):D127-35. PubMed ID: 18988624
    [TBL] [Abstract][Full Text] [Related]  

  • 4. Structure of the autoregulatory pseudoknot within the gene 32 messenger RNA of bacteriophages T2 and T6: a model for a possible family of structurally related RNA pseudoknots.
    Du Z; Giedroc DP; Hoffman DW
    Biochemistry; 1996 Apr; 35(13):4187-98. PubMed ID: 8672455
    [TBL] [Abstract][Full Text] [Related]  

  • 5. HotKnots: heuristic prediction of RNA secondary structures including pseudoknots.
    Ren J; Rastegari B; Condon A; Hoos HH
    RNA; 2005 Oct; 11(10):1494-504. PubMed ID: 16199760
    [TBL] [Abstract][Full Text] [Related]  

  • 6. High sensitivity RNA pseudoknot prediction.
    Huang X; Ali H
    Nucleic Acids Res; 2007; 35(2):656-63. PubMed ID: 17179177
    [TBL] [Abstract][Full Text] [Related]  

  • 7. Asymmetry in RNA pseudoknots: observation and theory.
    Aalberts DP; Hodas NO
    Nucleic Acids Res; 2005; 33(7):2210-4. PubMed ID: 15831794
    [TBL] [Abstract][Full Text] [Related]  

  • 8. A rule-based approach for RNA pseudoknot prediction.
    Fu XZ; Wang H; Harrison RW; Harrison WL
    Int J Data Min Bioinform; 2008; 2(1):78-93. PubMed ID: 18399329
    [TBL] [Abstract][Full Text] [Related]  

  • 9. An efficient algorithm for planar drawing of RNA structures with pseudoknots of any type.
    Byun Y; Han K
    J Bioinform Comput Biol; 2016 Jun; 14(3):1650009. PubMed ID: 26932273
    [TBL] [Abstract][Full Text] [Related]  

  • 10. Identifying complete RNA structural ensembles including pseudoknots.
    Gupta A; Rahman R; Li K; Gribskov M
    RNA Biol; 2012 Feb; 9(2):187-99. PubMed ID: 22418849
    [TBL] [Abstract][Full Text] [Related]  

  • 11. Structural alignment of RNA with complex pseudoknot structure.
    Wong TK; Lam TW; Sung WK; Cheung BW; Yiu SM
    J Comput Biol; 2011 Jan; 18(1):97-108. PubMed ID: 21210732
    [TBL] [Abstract][Full Text] [Related]  

  • 12. PSEUDOVIEWER2: Visualization of RNA pseudoknots of any type.
    Han K; Byun Y
    Nucleic Acids Res; 2003 Jul; 31(13):3432-40. PubMed ID: 12824341
    [TBL] [Abstract][Full Text] [Related]  

  • 13. The tmRNA Website: invasion by an intron.
    Williams KP
    Nucleic Acids Res; 2002 Jan; 30(1):179-82. PubMed ID: 11752287
    [TBL] [Abstract][Full Text] [Related]  

  • 14. Pair stochastic tree adjoining grammars for aligning and predicting pseudoknot RNA structures.
    Matsui H; Sato K; Sakakibara Y
    Proc IEEE Comput Syst Bioinform Conf; 2004; ():290-9. PubMed ID: 16448022
    [TBL] [Abstract][Full Text] [Related]  

  • 15. An NMR and mutational study of the pseudoknot within the gene 32 mRNA of bacteriophage T2: insights into a family of structurally related RNA pseudoknots.
    Du Z; Hoffman DW
    Nucleic Acids Res; 1997 Mar; 25(6):1130-5. PubMed ID: 9092620
    [TBL] [Abstract][Full Text] [Related]  

  • 16. New developments in structure determination of pseudoknots.
    Hilbers CW; Michiels PJ; Heus HA
    Biopolymers; 1998; 48(2-3):137-53. PubMed ID: 10333742
    [TBL] [Abstract][Full Text] [Related]  

  • 17. Database on the structure of large ribosomal subunit RNA.
    De Rijk P; Caers A; Van de Peer Y; De Wachter R
    Nucleic Acids Res; 1998 Jan; 26(1):183-6. PubMed ID: 9399830
    [TBL] [Abstract][Full Text] [Related]  

  • 18. RNA Sampler: a new sampling based algorithm for common RNA secondary structure prediction and structural alignment.
    Xu X; Ji Y; Stormo GD
    Bioinformatics; 2007 Aug; 23(15):1883-91. PubMed ID: 17537756
    [TBL] [Abstract][Full Text] [Related]  

  • 19. Predicting structures and stabilities for H-type pseudoknots with interhelix loops.
    Cao S; Chen SJ
    RNA; 2009 Apr; 15(4):696-706. PubMed ID: 19237463
    [TBL] [Abstract][Full Text] [Related]  

  • 20. URS DataBase: universe of RNA structures and their motifs.
    Baulin E; Yacovlev V; Khachko D; Spirin S; Roytberg M
    Database (Oxford); 2016; 2016():. PubMed ID: 27242032
    [TBL] [Abstract][Full Text] [Related]  

    [Next]    [New Search]
    of 7.