These tools will no longer be maintained as of December 31, 2024. Archived website can be found here. PubMed4Hh GitHub repository can be found here. Contact NLM Customer Service if you have questions.


BIOMARKERS

Molecular Biopsy of Human Tumors

- a resource for Precision Medicine *

127 related articles for article (PubMed ID: 11153092)

  • 1. The practical use of the A* algorithm for exact multiple sequence alignment.
    Lermen M; Reinert K
    J Comput Biol; 2000; 7(5):655-71. PubMed ID: 11153092
    [TBL] [Abstract][Full Text] [Related]  

  • 2. Improving the practical space and time efficiency of the shortest-paths approach to sum-of-pairs multiple sequence alignment.
    Gupta SK; Kececioglu JD; Schäffer AA
    J Comput Biol; 1995; 2(3):459-72. PubMed ID: 8521275
    [TBL] [Abstract][Full Text] [Related]  

  • 3. An exact solution for the segment-to-segment multiple sequence alignment problem.
    Lenhof HP; Morgenstern B; Reinert K
    Bioinformatics; 1999 Mar; 15(3):203-10. PubMed ID: 10222407
    [TBL] [Abstract][Full Text] [Related]  

  • 4. Optimal sum-of-pairs multiple sequence alignment using incremental Carrillo and Lipman bounds.
    Konagurthu AS; Stuckey PJ
    J Comput Biol; 2006 Apr; 13(3):668-85. PubMed ID: 16706718
    [TBL] [Abstract][Full Text] [Related]  

  • 5. Using the FASTA program to search protein and DNA sequence databases.
    Pearson WR
    Methods Mol Biol; 1994; 25():365-89. PubMed ID: 8004177
    [No Abstract]   [Full Text] [Related]  

  • 6. SALSA: improved protein database searching by a new algorithm for assembly of sequence fragments into gapped alignments.
    Rognes T; Seeberg E
    Bioinformatics; 1998; 14(10):839-45. PubMed ID: 9927712
    [TBL] [Abstract][Full Text] [Related]  

  • 7. An adaptive and iterative algorithm for refining multiple sequence alignment.
    Wang Y; Li KB
    Comput Biol Chem; 2004 Apr; 28(2):141-8. PubMed ID: 15130542
    [TBL] [Abstract][Full Text] [Related]  

  • 8. Tsukuba BB: a branch and bound algorithm for local multiple alignment of DNA and protein sequences.
    Horton P
    J Comput Biol; 2001; 8(3):283-303. PubMed ID: 11535177
    [TBL] [Abstract][Full Text] [Related]  

  • 9. A simple genetic algorithm for multiple sequence alignment.
    Gondro C; Kinghorn BP
    Genet Mol Res; 2007 Oct; 6(4):964-82. PubMed ID: 18058716
    [TBL] [Abstract][Full Text] [Related]  

  • 10. Multiple sequence alignment using simulated annealing.
    Kim J; Pramanik S; Chung MJ
    Comput Appl Biosci; 1994 Jul; 10(4):419-26. PubMed ID: 7804875
    [TBL] [Abstract][Full Text] [Related]  

  • 11. Comprehensive study on iterative algorithms of multiple sequence alignment.
    Hirosawa M; Totoki Y; Hoshida M; Ishikawa M
    Comput Appl Biosci; 1995 Feb; 11(1):13-8. PubMed ID: 7796270
    [TBL] [Abstract][Full Text] [Related]  

  • 12. Dynamic use of multiple parameter sets in sequence alignment.
    Huang X; Brutlag DL
    Nucleic Acids Res; 2007; 35(2):678-86. PubMed ID: 17182633
    [TBL] [Abstract][Full Text] [Related]  

  • 13. A space-efficient algorithm for the constrained pairwise sequence alignment problem.
    He D; Arslan AN
    Genome Inform; 2005; 16(2):237-46. PubMed ID: 16901106
    [TBL] [Abstract][Full Text] [Related]  

  • 14. Staden: comparing sequences.
    Staden R
    Methods Mol Biol; 1994; 25():155-70. PubMed ID: 8004162
    [No Abstract]   [Full Text] [Related]  

  • 15. Introduction of a distance cut-off into structural alignment by the double dynamic programming algorithm.
    Toh H
    Comput Appl Biosci; 1997 Aug; 13(4):387-96. PubMed ID: 9283753
    [TBL] [Abstract][Full Text] [Related]  

  • 16. Super pairwise alignment (SPA): an efficient approach to global alignment for homologous sequences.
    Shen SY; Yang J; Yao A; Hwang PI
    J Comput Biol; 2002; 9(3):477-86. PubMed ID: 12162887
    [TBL] [Abstract][Full Text] [Related]  

  • 17. AntiClustal: Multiple Sequence Alignment by antipole clustering and linear approximate 1-median computation.
    Di Pietro C; Di Pietro V; Emmanuele G; Ferro A; Maugeri T; Modica E; Pigola G; Pulvirenti A; Purrello M; Ragusa M; Scalia M; Shasha D; Travali S; Zimmitti V
    Proc IEEE Comput Soc Bioinform Conf; 2003; 2():326-36. PubMed ID: 16452808
    [TBL] [Abstract][Full Text] [Related]  

  • 18. OXBench: a benchmark for evaluation of protein multiple sequence alignment accuracy.
    Raghava GP; Searle SM; Audley PC; Barber JD; Barton GJ
    BMC Bioinformatics; 2003 Oct; 4():47. PubMed ID: 14552658
    [TBL] [Abstract][Full Text] [Related]  

  • 19. MUSTANG: a multiple structural alignment algorithm.
    Konagurthu AS; Whisstock JC; Stuckey PJ; Lesk AM
    Proteins; 2006 Aug; 64(3):559-74. PubMed ID: 16736488
    [TBL] [Abstract][Full Text] [Related]  

  • 20. Combining many multiple alignments in one improved alignment.
    Bucka-Lassen K; Caprani O; Hein J
    Bioinformatics; 1999 Feb; 15(2):122-30. PubMed ID: 10089197
    [TBL] [Abstract][Full Text] [Related]  

    [Next]    [New Search]
    of 7.