These tools will no longer be maintained as of December 31, 2024. Archived website can be found here. PubMed4Hh GitHub repository can be found here. Contact NLM Customer Service if you have questions.
5. EcoCyc: an encyclopedia of Escherichia coli genes and metabolism. Karp PD; Riley M; Paley SM; Pelligrini-Toole A Nucleic Acids Res; 1996 Jan; 24(1):32-9. PubMed ID: 8594595 [TBL] [Abstract][Full Text] [Related]
6. The MultiOmics Explainer: explaining omics results in the context of a pathway/genome database. Paley S; Karp PD BMC Bioinformatics; 2019 Jul; 20(1):399. PubMed ID: 31319812 [TBL] [Abstract][Full Text] [Related]
7. EcoCyc: Encyclopedia of Escherichia coli genes and metabolism. Karp PD; Riley M; Paley SM; Pellegrini-Toole A; Krummenacker M Nucleic Acids Res; 1998 Jan; 26(1):50-3. PubMed ID: 9399798 [TBL] [Abstract][Full Text] [Related]
8. Eco Cyc: encyclopedia of Escherichia coli genes and metabolism. Karp PD; Riley M; Paley SM; Pellegrini-Toole A; Krummenacker M Nucleic Acids Res; 1999 Jan; 27(1):55-8. PubMed ID: 9847140 [TBL] [Abstract][Full Text] [Related]
9. Dead end metabolites--defining the known unknowns of the E. coli metabolic network. Mackie A; Keseler IM; Nolan L; Karp PD; Paulsen IT PLoS One; 2013; 8(9):e75210. PubMed ID: 24086468 [TBL] [Abstract][Full Text] [Related]
10. Computing minimal nutrient sets from metabolic networks via linear constraint solving. Eker S; Krummenacker M; Shearer AG; Tiwari A; Keseler IM; Talcott C; Karp PD BMC Bioinformatics; 2013 Mar; 14():114. PubMed ID: 23537498 [TBL] [Abstract][Full Text] [Related]
12. EcoCyc: Enyclopedia of Escherichia coli Genes and Metabolism. Karp PD; Riley M; Paley SM; Pellegrini-Toole A; Krummenacker M Nucleic Acids Res; 1997 Jan; 25(1):43-51. PubMed ID: 9016502 [TBL] [Abstract][Full Text] [Related]
13. Metabolome searcher: a high throughput tool for metabolite identification and metabolic pathway mapping directly from mass spectrometry and using genome restriction. Dhanasekaran AR; Pearson JL; Ganesan B; Weimer BC BMC Bioinformatics; 2015 Feb; 16(1):62. PubMed ID: 25887958 [TBL] [Abstract][Full Text] [Related]
14. Adapting EcoCyc for use on the World Wide Web. Paley SM; Karp PD Gene; 1996 Jun; 172(1):GC43-50. PubMed ID: 8654966 [TBL] [Abstract][Full Text] [Related]
15. An extended bioreaction database that significantly improves reconstruction and analysis of genome-scale metabolic networks. Stelzer M; Sun J; Kamphans T; Fekete SP; Zeng AP Integr Biol (Camb); 2011 Nov; 3(11):1071-86. PubMed ID: 21952610 [TBL] [Abstract][Full Text] [Related]