These tools will no longer be maintained as of December 31, 2024. Archived website can be found here. PubMed4Hh GitHub repository can be found here. Contact NLM Customer Service if you have questions.


BIOMARKERS

Molecular Biopsy of Human Tumors

- a resource for Precision Medicine *

144 related articles for article (PubMed ID: 11266608)

  • 21. 50 years of amino acid hydrophobicity scales: revisiting the capacity for peptide classification.
    Simm S; Einloft J; Mirus O; Schleiff E
    Biol Res; 2016 Jul; 49(1):31. PubMed ID: 27378087
    [TBL] [Abstract][Full Text] [Related]  

  • 22. Positions of polar amino acids alter interactions between transmembrane segments and detergents.
    Tulumello DV; Deber CM
    Biochemistry; 2011 May; 50(19):3928-35. PubMed ID: 21473646
    [TBL] [Abstract][Full Text] [Related]  

  • 23. Families of membranous proteins can be characterized by the amino acid composition of their transmembrane domains.
    Sadka T; Linial M
    Bioinformatics; 2005 Jun; 21 Suppl 1():i378-86. PubMed ID: 15961481
    [TBL] [Abstract][Full Text] [Related]  

  • 24. Transmembrane helix prediction in proteins using hydrophobicity properties and higher-order statistics.
    Kitsas IK; Hadjileontiadis LJ; Panas SM
    Comput Biol Med; 2008 Aug; 38(8):867-80. PubMed ID: 18586233
    [TBL] [Abstract][Full Text] [Related]  

  • 25. Peptides in membranes: helicity and hydrophobicity.
    Deber CM; Li SC
    Biopolymers; 1995; 37(5):295-318. PubMed ID: 7632880
    [TBL] [Abstract][Full Text] [Related]  

  • 26. Uncoupling hydrophobicity and helicity in transmembrane segments. Alpha-helical propensities of the amino acids in non-polar environments.
    Liu LP; Deber CM
    J Biol Chem; 1998 Sep; 273(37):23645-8. PubMed ID: 9726967
    [TBL] [Abstract][Full Text] [Related]  

  • 27. Evaluating transmembrane topology prediction methods for the effect of signal peptide in topology prediction.
    Lao DM; Okuno T; Shimizu T
    In Silico Biol; 2002; 2(4):485-94. PubMed ID: 12611628
    [TBL] [Abstract][Full Text] [Related]  

  • 28. PDB_TM: selection and membrane localization of transmembrane proteins in the protein data bank.
    Tusnády GE; Dosztányi Z; Simon I
    Nucleic Acids Res; 2005 Jan; 33(Database issue):D275-8. PubMed ID: 15608195
    [TBL] [Abstract][Full Text] [Related]  

  • 29. Cumulative effects of amino acid substitutions and hydrophobic mismatch upon the transmembrane stability and conformation of hydrophobic alpha-helices.
    Caputo GA; London E
    Biochemistry; 2003 Mar; 42(11):3275-85. PubMed ID: 12641459
    [TBL] [Abstract][Full Text] [Related]  

  • 30. Optimizing synthesis and expression of transmembrane peptides and proteins.
    Cunningham F; Deber CM
    Methods; 2007 Apr; 41(4):370-80. PubMed ID: 17367709
    [TBL] [Abstract][Full Text] [Related]  

  • 31. Assigning transmembrane segments to helices in intermediate-resolution structures.
    Enosh A; Fleishman SJ; Ben-Tal N; Halperin D
    Bioinformatics; 2004 Aug; 20 Suppl 1():i122-9. PubMed ID: 15262790
    [TBL] [Abstract][Full Text] [Related]  

  • 32. Genetic algorithm-based optimization of hydrophobicity tables.
    Zviling M; Leonov H; Arkin IT
    Bioinformatics; 2005 Jun; 21(11):2651-6. PubMed ID: 15797910
    [TBL] [Abstract][Full Text] [Related]  

  • 33. Prediction of rotational orientation of transmembrane helical segments of integral membrane proteins using new environment-based propensities for amino acids derived from structural analyses.
    Dastmalchi S; Beheshti S; Morris MB; Church WB
    FEBS J; 2007 May; 274(10):2653-60. PubMed ID: 17451441
    [TBL] [Abstract][Full Text] [Related]  

  • 34. Characterization of peptides corresponding to the seven transmembrane domains of human adenosine A2a receptor.
    Lazarova T; Brewin KA; Stoeber K; Robinson CR
    Biochemistry; 2004 Oct; 43(40):12945-54. PubMed ID: 15461468
    [TBL] [Abstract][Full Text] [Related]  

  • 35. TMBETA-NET: discrimination and prediction of membrane spanning beta-strands in outer membrane proteins.
    Gromiha MM; Ahmad S; Suwa M
    Nucleic Acids Res; 2005 Jul; 33(Web Server issue):W164-7. PubMed ID: 15980447
    [TBL] [Abstract][Full Text] [Related]  

  • 36. Physicochemical factors for discriminating between soluble and membrane proteins: hydrophobicity of helical segments and protein length.
    Mitaku S; Hirokawa T
    Protein Eng; 1999 Nov; 12(11):953-7. PubMed ID: 10585500
    [TBL] [Abstract][Full Text] [Related]  

  • 37. A fast method for the quantitative estimation of the distribution of hydrophobic and hydrophilic segments in alpha-helices of membrane proteins.
    Luzhkov VB; Surkov NF
    Membr Cell Biol; 2000; 14(1):89-96. PubMed ID: 11051085
    [TBL] [Abstract][Full Text] [Related]  

  • 38. Cooperation of transmembrane segments during the integration of a double-spanning protein into the ER membrane.
    Heinrich SU; Rapoport TA
    EMBO J; 2003 Jul; 22(14):3654-63. PubMed ID: 12853480
    [TBL] [Abstract][Full Text] [Related]  

  • 39. Prediction of the translocon-mediated membrane insertion free energies of protein sequences.
    Park Y; Helms V
    Bioinformatics; 2008 May; 24(10):1271-7. PubMed ID: 18388143
    [TBL] [Abstract][Full Text] [Related]  

  • 40. transFold: a web server for predicting the structure and residue contacts of transmembrane beta-barrels.
    Waldispühl J; Berger B; Clote P; Steyaert JM
    Nucleic Acids Res; 2006 Jul; 34(Web Server issue):W189-93. PubMed ID: 16844989
    [TBL] [Abstract][Full Text] [Related]  

    [Previous]   [Next]    [New Search]
    of 8.