These tools will no longer be maintained as of December 31, 2024. Archived website can be found here. PubMed4Hh GitHub repository can be found here. Contact NLM Customer Service if you have questions.
125 related articles for article (PubMed ID: 11275307)
1. Transcription unit conservation in the three domains of life: a perspective from Escherichia coli. Moreno-Hagelsieb G; Treviño V; Pérez-Rueda E; Smith TF; Collado-Vides J Trends Genet; 2001 Apr; 17(4):175-7. PubMed ID: 11275307 [TBL] [Abstract][Full Text] [Related]
2. Operon conservation from the point of view of Escherichia coli, and inference of functional interdependence of gene products from genome context. Moreno-Hagelsieb G; Collado-Vides J In Silico Biol; 2002; 2(2):87-95. PubMed ID: 12066843 [TBL] [Abstract][Full Text] [Related]
3. The distinctive signatures of promoter regions and operon junctions across prokaryotes. Janga SC; Lamboy WF; Huerta AM; Moreno-Hagelsieb G Nucleic Acids Res; 2006; 34(14):3980-7. PubMed ID: 16914446 [TBL] [Abstract][Full Text] [Related]
4. Operons in Escherichia coli: genomic analyses and predictions. Salgado H; Moreno-Hagelsieb G; Smith TF; Collado-Vides J Proc Natl Acad Sci U S A; 2000 Jun; 97(12):6652-7. PubMed ID: 10823905 [TBL] [Abstract][Full Text] [Related]
5. Unprecedented high-resolution view of bacterial operon architecture revealed by RNA sequencing. Conway T; Creecy JP; Maddox SM; Grissom JE; Conkle TL; Shadid TM; Teramoto J; San Miguel P; Shimada T; Ishihama A; Mori H; Wanner BL mBio; 2014 Jul; 5(4):e01442-14. PubMed ID: 25006232 [TBL] [Abstract][Full Text] [Related]
6. Analysis of the cellular functions of Escherichia coli operons and their conservation in Bacillus subtilis. de Daruvar A; Collado-Vides J; Valencia A J Mol Evol; 2002 Aug; 55(2):211-21. PubMed ID: 12107597 [TBL] [Abstract][Full Text] [Related]
7. Evolutionary conservation of bacterial operons: does transcriptional connectivity matter? Hazkani-Covo E; Graur D Genetica; 2005 Jul; 124(2-3):145-66. PubMed ID: 16134329 [TBL] [Abstract][Full Text] [Related]
8. Conserved Units of Co-Expression in Bacterial Genomes: An Evolutionary Insight into Transcriptional Regulation. Junier I; Rivoire O PLoS One; 2016; 11(5):e0155740. PubMed ID: 27195891 [TBL] [Abstract][Full Text] [Related]
9. The genes encoding endonuclease VIII and endonuclease III in Escherichia coli are transcribed as the terminal genes in operons. Gifford CM; Wallace SS Nucleic Acids Res; 2000 Feb; 28(3):762-9. PubMed ID: 10637328 [TBL] [Abstract][Full Text] [Related]
10. Characterization of relationships between transcriptional units and operon structures in Bacillus subtilis and Escherichia coli. Okuda S; Kawashima S; Kobayashi K; Ogasawara N; Kanehisa M; Goto S BMC Genomics; 2007 Feb; 8():48. PubMed ID: 17298663 [TBL] [Abstract][Full Text] [Related]
11. Transcribed intergenic regions exhibit a lower frequency of nucleotide polymorphism than the untranscribed intergenic regions in the genomes of Beura PK; Sen P; Aziz R; Shankar Satapathy S; Kumar Ray S J Genet; 2023; 102():. PubMed ID: 36823684 [TBL] [Abstract][Full Text] [Related]
12. A universally applicable method of operon map prediction on minimally annotated genomes using conserved genomic context. Edwards MT; Rison SC; Stoker NG; Wernisch L Nucleic Acids Res; 2005; 33(10):3253-62. PubMed ID: 15942028 [TBL] [Abstract][Full Text] [Related]
13. A Search for Ribonucleic Antiterminator Sites in Bacterial Genomes: Not Only Antitermination? Gordon N; Rosenblum R; Nussbaum-Shochat A; Eliahoo E; Amster-Choder O J Mol Microbiol Biotechnol; 2015; 25(2-3):143-53. PubMed ID: 26159075 [TBL] [Abstract][Full Text] [Related]
14. Evolutionary instability of operon structures disclosed by sequence comparisons of complete microbial genomes. Itoh T; Takemoto K; Mori H; Gojobori T Mol Biol Evol; 1999 Mar; 16(3):332-46. PubMed ID: 10331260 [TBL] [Abstract][Full Text] [Related]
15. Expression of cnf1 by Escherichia coli J96 involves a large upstream DNA region including the hlyCABD operon, and is regulated by the RfaH protein. Landraud L; Gibert M; Popoff MR; Boquet P; Gauthier M Mol Microbiol; 2003 Mar; 47(6):1653-67. PubMed ID: 12622819 [TBL] [Abstract][Full Text] [Related]
16. Computational identification of operons in microbial genomes. Zheng Y; Szustakowski JD; Fortnow L; Roberts RJ; Kasif S Genome Res; 2002 Aug; 12(8):1221-30. PubMed ID: 12176930 [TBL] [Abstract][Full Text] [Related]
17. Precise mapping and comparison of two evolutionarily related regions of the Escherichia coli K-12 chromosome. Evolution of valU and lysT from an ancestral tRNA operon. Brun YV; Breton R; Lanouette P; Lapointe J J Mol Biol; 1990 Aug; 214(4):825-43. PubMed ID: 2201776 [TBL] [Abstract][Full Text] [Related]
18. Closely spaced and divergent promoters for an aminoacyl-tRNA synthetase gene and a tRNA operon in Escherichia coli. Transcriptional and post-transcriptional regulation of gltX, valU and alaW. Brun YV; Sanfaçon H; Breton R; Lapointe J J Mol Biol; 1990 Aug; 214(4):845-64. PubMed ID: 2201777 [TBL] [Abstract][Full Text] [Related]
19. Attenuation and processing of RNA from the rpsO-pnp transcription unit of Escherichia coli. Takata R; Mukai T; Hori K Nucleic Acids Res; 1985 Oct; 13(20):7289-97. PubMed ID: 2414737 [TBL] [Abstract][Full Text] [Related]
20. Conservation of adjacency as evidence of paralogous operons. Janga SC; Moreno-Hagelsieb G Nucleic Acids Res; 2004; 32(18):5392-7. PubMed ID: 15477389 [TBL] [Abstract][Full Text] [Related] [Next] [New Search]