BIOMARKERS

Molecular Biopsy of Human Tumors

- a resource for Precision Medicine *

568 related articles for article (PubMed ID: 11397084)

  • 1. Sequence-specific recognition of DNA in the nucleosome by pyrrole-imidazole polyamides.
    Gottesfeld JM; Melander C; Suto RK; Raviol H; Luger K; Dervan PB
    J Mol Biol; 2001 Jun; 309(3):615-29. PubMed ID: 11397084
    [TBL] [Abstract][Full Text] [Related]  

  • 2. Crystal structures of nucleosome core particles in complex with minor groove DNA-binding ligands.
    Suto RK; Edayathumangalam RS; White CL; Melander C; Gottesfeld JM; Dervan PB; Luger K
    J Mol Biol; 2003 Feb; 326(2):371-80. PubMed ID: 12559907
    [TBL] [Abstract][Full Text] [Related]  

  • 3. Blocking transcription through a nucleosome with synthetic DNA ligands.
    Gottesfeld JM; Belitsky JM; Melander C; Dervan PB; Luger K
    J Mol Biol; 2002 Aug; 321(2):249-63. PubMed ID: 12144782
    [TBL] [Abstract][Full Text] [Related]  

  • 4. Effects of the N-terminal acylamido group of imidazole- and pyrrole-containing polyamides on DNA sequence specificity and binding affinity.
    Westrate L; Mackay H; Brown T; Nguyen B; Kluza J; Wilson WD; Lee M; Hartley JA
    Biochemistry; 2009 Jun; 48(24):5679-88. PubMed ID: 19419200
    [TBL] [Abstract][Full Text] [Related]  

  • 5. Solvent mediated interactions in the structure of the nucleosome core particle at 1.9 a resolution.
    Davey CA; Sargent DF; Luger K; Maeder AW; Richmond TJ
    J Mol Biol; 2002 Jun; 319(5):1097-113. PubMed ID: 12079350
    [TBL] [Abstract][Full Text] [Related]  

  • 6. Targeting the inverted CCAAT box 2 in the topoisomerase IIalpha promoter by JH-37, an imidazole-pyrrole polyamide hairpin: design, synthesis, molecular biology, and biophysical studies.
    Henry JA; Le NM; Nguyen B; Howard CM; Bailey SL; Horick SM; Buchmueller KL; Kotecha M; Hochhauser D; Hartley JA; Wilson WD; Lee M
    Biochemistry; 2004 Sep; 43(38):12249-57. PubMed ID: 15379563
    [TBL] [Abstract][Full Text] [Related]  

  • 7. DNA distortion as a factor in nucleosome positioning.
    Fitzgerald DJ; Anderson JN
    J Mol Biol; 1999 Oct; 293(3):477-91. PubMed ID: 10543944
    [TBL] [Abstract][Full Text] [Related]  

  • 8. Two DNA-binding sites on the globular domain of histone H5 are required for binding to both bulk and 5 S reconstituted nucleosomes.
    Duggan MM; Thomas JO
    J Mol Biol; 2000 Nov; 304(1):21-33. PubMed ID: 11071807
    [TBL] [Abstract][Full Text] [Related]  

  • 9. The mouse mammary tumour virus promoter positioned on a tetramer of histones H3 and H4 binds nuclear factor 1 and OTF1.
    Spangenberg C; Eisfeld K; Stünkel W; Luger K; Flaus A; Richmond TJ; Truss M; Beato M
    J Mol Biol; 1998 May; 278(4):725-39. PubMed ID: 9614938
    [TBL] [Abstract][Full Text] [Related]  

  • 10. Effects of the A.T/T.A degeneracy of pyrrole--imidazole polyamide recognition in the minor groove of DNA.
    White S; Baird EE; Dervan PB
    Biochemistry; 1996 Sep; 35(38):12532-7. PubMed ID: 8823190
    [TBL] [Abstract][Full Text] [Related]  

  • 11. Extending the language of DNA molecular recognition by polyamides: unexpected influence of imidazole and pyrrole arrangement on binding affinity and specificity.
    Buchmueller KL; Staples AM; Howard CM; Horick SM; Uthe PB; Le NM; Cox KK; Nguyen B; Pacheco KA; Wilson WD; Lee M
    J Am Chem Soc; 2005 Jan; 127(2):742-50. PubMed ID: 15643900
    [TBL] [Abstract][Full Text] [Related]  

  • 12. Sequence recognition in the minor groove of DNA by covalently linked formamido imidazole-pyrrole-imidazole polyamides: effect of H-pin linkage and linker length on selectivity and affinity.
    O'Hare CC; Uthe P; Mackay H; Blackmon K; Jones J; Brown T; Nguyen B; Wilson WD; Lee M; Hartley JA
    Biochemistry; 2007 Oct; 46(42):11661-70. PubMed ID: 17910471
    [TBL] [Abstract][Full Text] [Related]  

  • 13. Combinatorial determination of sequence specificity for nanomolar DNA-binding hairpin polyamides.
    Vashisht Gopal YN; Van Dyke MW
    Biochemistry; 2003 Jun; 42(22):6891-903. PubMed ID: 12779344
    [TBL] [Abstract][Full Text] [Related]  

  • 14. Specific contributions of histone tails and their acetylation to the mechanical stability of nucleosomes.
    Brower-Toland B; Wacker DA; Fulbright RM; Lis JT; Kraus WL; Wang MD
    J Mol Biol; 2005 Feb; 346(1):135-46. PubMed ID: 15663933
    [TBL] [Abstract][Full Text] [Related]  

  • 15. Substrate structure influences binding of the non-histone protein HMG-I(Y) to free nucleosomal DNA.
    Reeves R; Wolffe AP
    Biochemistry; 1996 Apr; 35(15):5063-74. PubMed ID: 8664299
    [TBL] [Abstract][Full Text] [Related]  

  • 16. DNA recognition and nucleosome organization.
    Travers A; Drew H
    Biopolymers; 1997; 44(4):423-33. PubMed ID: 9782778
    [TBL] [Abstract][Full Text] [Related]  

  • 17. Sequence dependence of translational positioning of core nucleosomes.
    Negri R; Buttinelli M; Panetta G; De Arcangelis V; Di Mauro E; Travers A
    J Mol Biol; 2001 Apr; 307(4):987-99. PubMed ID: 11286550
    [TBL] [Abstract][Full Text] [Related]  

  • 18. Expanding the repertoire of heterocycle ring pairs for programmable minor groove DNA recognition.
    Marques MA; Doss RM; Foister S; Dervan PB
    J Am Chem Soc; 2004 Aug; 126(33):10339-49. PubMed ID: 15315448
    [TBL] [Abstract][Full Text] [Related]  

  • 19. Anti-repression of RNA polymerase II transcription by pyrrole-imidazole polyamides.
    Dickinson LA; Trauger JW; Baird EE; Ghazal P; Dervan PB; Gottesfeld JM
    Biochemistry; 1999 Aug; 38(33):10801-7. PubMed ID: 10451376
    [TBL] [Abstract][Full Text] [Related]  

  • 20. Structure and dynamics of nucleosomal DNA.
    Muthurajan UM; Park YJ; Edayathumangalam RS; Suto RK; Chakravarthy S; Dyer PN; Luger K
    Biopolymers; 2003 Apr; 68(4):547-56. PubMed ID: 12666179
    [TBL] [Abstract][Full Text] [Related]  

    [Next]    [New Search]
    of 29.