312 related articles for article (PubMed ID: 11433035)
1. SPINE: an integrated tracking database and data mining approach for identifying feasible targets in high-throughput structural proteomics.
Bertone P; Kluger Y; Lan N; Zheng D; Christendat D; Yee A; Edwards AM; Arrowsmith CH; Montelione GT; Gerstein M
Nucleic Acids Res; 2001 Jul; 29(13):2884-98. PubMed ID: 11433035
[TBL] [Abstract][Full Text] [Related]
2. SPINE 2: a system for collaborative structural proteomics within a federated database framework.
Goh CS; Lan N; Echols N; Douglas SM; Milburn D; Bertone P; Xiao R; Ma LC; Zheng D; Wunderlich Z; Acton T; Montelione GT; Gerstein M
Nucleic Acids Res; 2003 Jun; 31(11):2833-8. PubMed ID: 12771210
[TBL] [Abstract][Full Text] [Related]
3. Mining the structural genomics pipeline: identification of protein properties that affect high-throughput experimental analysis.
Goh CS; Lan N; Douglas SM; Wu B; Echols N; Smith A; Milburn D; Montelione GT; Zhao H; Gerstein M
J Mol Biol; 2004 Feb; 336(1):115-30. PubMed ID: 14741208
[TBL] [Abstract][Full Text] [Related]
4. A Bayesian system integrating expression data with sequence patterns for localizing proteins: comprehensive application to the yeast genome.
Drawid A; Gerstein M
J Mol Biol; 2000 Aug; 301(4):1059-75. PubMed ID: 10966805
[TBL] [Abstract][Full Text] [Related]
5. Structural proteomics: toward high-throughput structural biology as a tool in functional genomics.
Yee A; Pardee K; Christendat D; Savchenko A; Edwards AM; Arrowsmith CH
Acc Chem Res; 2003 Mar; 36(3):183-9. PubMed ID: 12641475
[TBL] [Abstract][Full Text] [Related]
6. Data mining in protein interactomics. Six computational research challenges and opportunities.
Chen JY; Sivachenko AY
IEEE Eng Med Biol Mag; 2005; 24(3):95-102. PubMed ID: 15971847
[No Abstract] [Full Text] [Related]
7. Structural proteomics of an archaeon.
Christendat D; Yee A; Dharamsi A; Kluger Y; Savchenko A; Cort JR; Booth V; Mackereth CD; Saridakis V; Ekiel I; Kozlov G; Maxwell KL; Wu N; McIntosh LP; Gehring K; Kennedy MA; Davidson AR; Pai EF; Gerstein M; Edwards AM; Arrowsmith CH
Nat Struct Biol; 2000 Oct; 7(10):903-9. PubMed ID: 11017201
[TBL] [Abstract][Full Text] [Related]
8. DEPD: a novel database for differentially expressed proteins.
He QY; Cao J; Liu XH; Li MX; Liu YS; Xie JY; Liang SP
Bioinformatics; 2005 Sep; 21(18):3694-6. PubMed ID: 16020467
[TBL] [Abstract][Full Text] [Related]
9. Construction of a nasopharyngeal carcinoma 2D/MS repository with Open Source XML database--Xindice.
Li F; Li M; Xiao Z; Zhang P; Li J; Chen Z
BMC Bioinformatics; 2006 Jan; 7():13. PubMed ID: 16403238
[TBL] [Abstract][Full Text] [Related]
10. Textpresso: an ontology-based information retrieval and extraction system for biological literature.
Müller HM; Kenny EE; Sternberg PW
PLoS Biol; 2004 Nov; 2(11):e309. PubMed ID: 15383839
[TBL] [Abstract][Full Text] [Related]
11. Legume Resources: MtDB and Medicago.Org.
Retzel EF; Johnson JE; Crow JA; Lamblin AF; Paule CE
Methods Mol Biol; 2007; 406():261-74. PubMed ID: 18287697
[TBL] [Abstract][Full Text] [Related]
12. Reliability measures for membrane protein topology prediction algorithms.
Melén K; Krogh A; von Heijne G
J Mol Biol; 2003 Mar; 327(3):735-44. PubMed ID: 12634065
[TBL] [Abstract][Full Text] [Related]
13. 3D-GENOMICS: a database to compare structural and functional annotations of proteins between sequenced genomes.
Fleming K; Müller A; MacCallum RM; Sternberg MJ
Nucleic Acids Res; 2004 Jan; 32(Database issue):D245-50. PubMed ID: 14681404
[TBL] [Abstract][Full Text] [Related]
14. The jPOST environment: an integrated proteomics data repository and database.
Moriya Y; Kawano S; Okuda S; Watanabe Y; Matsumoto M; Takami T; Kobayashi D; Yamanouchi Y; Araki N; Yoshizawa AC; Tabata T; Iwasaki M; Sugiyama N; Tanaka S; Goto S; Ishihama Y
Nucleic Acids Res; 2019 Jan; 47(D1):D1218-D1224. PubMed ID: 30295851
[TBL] [Abstract][Full Text] [Related]
15. The Protein Data Bank and the challenge of structural genomics.
Berman HM; Bhat TN; Bourne PE; Feng Z; Gilliland G; Weissig H; Westbrook J
Nat Struct Biol; 2000 Nov; 7 Suppl():957-9. PubMed ID: 11103999
[TBL] [Abstract][Full Text] [Related]
16. PartsList: a web-based system for dynamically ranking protein folds based on disparate attributes, including whole-genome expression and interaction information.
Qian J; Stenger B; Wilson CA; Lin J; Jansen R; Teichmann SA; Park J; Krebs WG; Yu H; Alexandrov V; Echols N; Gerstein M
Nucleic Acids Res; 2001 Apr; 29(8):1750-64. PubMed ID: 11292848
[TBL] [Abstract][Full Text] [Related]
17. Correlation and prediction of gene expression level from amino acid and dipeptide composition of its protein.
Raghava GP; Han JH
BMC Bioinformatics; 2005 Mar; 6():59. PubMed ID: 15773999
[TBL] [Abstract][Full Text] [Related]
18. Predicting protein crystallization propensity from protein sequence.
Babnigg G; Joachimiak A
J Struct Funct Genomics; 2010 Mar; 11(1):71-80. PubMed ID: 20177794
[TBL] [Abstract][Full Text] [Related]
19. The Genomic Threading Database: a comprehensive resource for structural annotations of the genomes from key organisms.
McGuffin LJ; Street SA; Bryson K; Sørensen SA; Jones DT
Nucleic Acids Res; 2004 Jan; 32(Database issue):D196-9. PubMed ID: 14681393
[TBL] [Abstract][Full Text] [Related]
20. LinkHub: a Semantic Web system that facilitates cross-database queries and information retrieval in proteomics.
Smith AK; Cheung KH; Yip KY; Schultz M; Gerstein MK
BMC Bioinformatics; 2007 May; 8 Suppl 3(Suppl 3):S5. PubMed ID: 17493288
[TBL] [Abstract][Full Text] [Related]
[Next] [New Search]