BIOMARKERS

Molecular Biopsy of Human Tumors

- a resource for Precision Medicine *

125 related articles for article (PubMed ID: 11473001)

  • 1. Probabilistic divergence measures for detecting interspecies recombination.
    Husmeier D; Wright F
    Bioinformatics; 2001; 17 Suppl 1():S123-31. PubMed ID: 11473001
    [TBL] [Abstract][Full Text] [Related]  

  • 2. Detecting recombination with MCMC.
    Husmeier D; McGuire G
    Bioinformatics; 2002; 18 Suppl 1():S345-53. PubMed ID: 12169565
    [TBL] [Abstract][Full Text] [Related]  

  • 3. Detecting recombination in 4-taxa DNA sequence alignments with Bayesian hidden Markov models and Markov chain Monte Carlo.
    Husmeier D; McGuire G
    Mol Biol Evol; 2003 Mar; 20(3):315-37. PubMed ID: 12644553
    [TBL] [Abstract][Full Text] [Related]  

  • 4. A Bayesian model for detecting past recombination events in DNA multiple alignments.
    McGuire G; Wright F; Prentice MJ
    J Comput Biol; 2000; 7(1-2):159-70. PubMed ID: 10890393
    [TBL] [Abstract][Full Text] [Related]  

  • 5. Addressing the shortcomings of three recent Bayesian methods for detecting interspecific recombination in DNA sequence alignments.
    Husmeier D; Mantzaris AV
    Stat Appl Genet Mol Biol; 2008; 7(1):Article 34. PubMed ID: 19049490
    [TBL] [Abstract][Full Text] [Related]  

  • 6. Bayesian coestimation of phylogeny and sequence alignment.
    Lunter G; Miklós I; Drummond A; Jensen JL; Hein J
    BMC Bioinformatics; 2005 Apr; 6():83. PubMed ID: 15804354
    [TBL] [Abstract][Full Text] [Related]  

  • 7. Detection of recombination in DNA multiple alignments with hidden Markov models.
    Husmeier D; Wright F
    J Comput Biol; 2001; 8(4):401-27. PubMed ID: 11571075
    [TBL] [Abstract][Full Text] [Related]  

  • 8. Detecting interspecific recombination with a pruned probabilistic divergence measure.
    Husmeier D; Wright F; Milne I
    Bioinformatics; 2005 May; 21(9):1797-806. PubMed ID: 15572473
    [TBL] [Abstract][Full Text] [Related]  

  • 9. A heuristic Bayesian method for segmenting DNA sequence alignments and detecting evidence for recombination and gene conversion.
    Kedzierska A; Husmeier D
    Stat Appl Genet Mol Biol; 2006; 5():Article27. PubMed ID: 17140392
    [TBL] [Abstract][Full Text] [Related]  

  • 10. Sequence alignments and pair hidden Markov models using evolutionary history.
    Knudsen B; Miyamoto MM
    J Mol Biol; 2003 Oct; 333(2):453-60. PubMed ID: 14529629
    [TBL] [Abstract][Full Text] [Related]  

  • 11. Discriminating between rate heterogeneity and interspecific recombination in DNA sequence alignments with phylogenetic factorial hidden Markov models.
    Husmeier D
    Bioinformatics; 2005 Sep; 21 Suppl 2():ii166-72. PubMed ID: 16204097
    [TBL] [Abstract][Full Text] [Related]  

  • 12. Probabilistic phylogenetic inference with insertions and deletions.
    Rivas E; Eddy SR
    PLoS Comput Biol; 2008 Sep; 4(9):e1000172. PubMed ID: 18787703
    [TBL] [Abstract][Full Text] [Related]  

  • 13. A Bayesian approach to discriminate between alternative DNA sequence segmentations.
    Husmeier D; Wright F
    Bioinformatics; 2002 Feb; 18(2):226-34. PubMed ID: 11847070
    [TBL] [Abstract][Full Text] [Related]  

  • 14. ACG: rapid inference of population history from recombining nucleotide sequences.
    O'Fallon BD
    BMC Bioinformatics; 2013 Feb; 14():40. PubMed ID: 23379678
    [TBL] [Abstract][Full Text] [Related]  

  • 15. Automated phylogenetic detection of recombination using a genetic algorithm.
    Kosakovsky Pond SL; Posada D; Gravenor MB; Woelk CH; Frost SD
    Mol Biol Evol; 2006 Oct; 23(10):1891-901. PubMed ID: 16818476
    [TBL] [Abstract][Full Text] [Related]  

  • 16. TOPAL: recombination detection in DNA and protein sequences.
    McGuire G; Wright F
    Bioinformatics; 1998; 14(2):219-20. PubMed ID: 9545456
    [TBL] [Abstract][Full Text] [Related]  

  • 17. Joint Bayesian estimation of alignment and phylogeny.
    Redelings BD; Suchard MA
    Syst Biol; 2005 Jun; 54(3):401-18. PubMed ID: 16012107
    [TBL] [Abstract][Full Text] [Related]  

  • 18. SlidingBayes: exploring recombination using a sliding window approach based on Bayesian phylogenetic inference.
    Paraskevis D; Deforche K; Lemey P; Magiorkinis G; Hatzakis A; Vandamme AM
    Bioinformatics; 2005 Apr; 21(7):1274-5. PubMed ID: 15546940
    [TBL] [Abstract][Full Text] [Related]  

  • 19. Accurate statistics for local sequence alignment with position-dependent scoring by rare-event sampling.
    Wolfsheimer S; Herms I; Rahmann S; Hartmann AK
    BMC Bioinformatics; 2011 Feb; 12():47. PubMed ID: 21291566
    [TBL] [Abstract][Full Text] [Related]  

  • 20. PhyloGibbs: a Gibbs sampling motif finder that incorporates phylogeny.
    Siddharthan R; Siggia ED; van Nimwegen E
    PLoS Comput Biol; 2005 Dec; 1(7):e67. PubMed ID: 16477324
    [TBL] [Abstract][Full Text] [Related]  

    [Next]    [New Search]
    of 7.