236 related articles for article (PubMed ID: 11554791)
21. Topoisomerase II-mediated DNA cleavage: evidence for distinct regions of enzyme-DNA contacts.
Alsner J; Sorensen HV; Schmidt VK; Sorensen BS; Westergaard O
J Mol Biol; 1996 Jun; 259(3):317-24. PubMed ID: 8676370
[TBL] [Abstract][Full Text] [Related]
22. Deciphering the distinct role for the metal coordination motif in the catalytic activity of Mycobacterium smegmatis topoisomerase I.
Bhat AG; Leelaram MN; Hegde SM; Nagaraja V
J Mol Biol; 2009 Nov; 393(4):788-802. PubMed ID: 19733176
[TBL] [Abstract][Full Text] [Related]
23. Preferential relaxation of supercoiled DNA containing a hexadecameric recognition sequence for topoisomerase I.
Busk H; Thomsen B; Bonven BJ; Kjeldsen E; Nielsen OF; Westergaard O
Nature; 1987 Jun 18-24; 327(6123):638-40. PubMed ID: 3037376
[TBL] [Abstract][Full Text] [Related]
24. Unidirectional translocation from recognition site and a necessary interaction with DNA end for cleavage by Type III restriction enzyme.
Raghavendra NK; Rao DN
Nucleic Acids Res; 2004; 32(19):5703-11. PubMed ID: 15501920
[TBL] [Abstract][Full Text] [Related]
25. Crystal structure of a ternary SAP-1/SRF/c-fos SRE DNA complex.
Mo Y; Ho W; Johnston K; Marmorstein R
J Mol Biol; 2001 Nov; 314(3):495-506. PubMed ID: 11846562
[TBL] [Abstract][Full Text] [Related]
26. Potassium permanganate as a probe to map DNA-protein interactions in vivo.
Spicuglia S; Kumar S; Chasson L; Payet-Bornet D; Ferrier P
J Biochem Biophys Methods; 2004 May; 59(2):189-94. PubMed ID: 15163530
[TBL] [Abstract][Full Text] [Related]
27. Symmetry and chirality in topoisomerase II-DNA crossover recognition.
Timsit Y; Duplantier B; Jannink G; Sikorav JL
J Mol Biol; 1998 Dec; 284(5):1289-99. PubMed ID: 9878350
[TBL] [Abstract][Full Text] [Related]
28. [The role of weak specific and nonspecific interactions in recognition and conversation by enzymes of long DNA].
Nevinskiĭ GA
Mol Biol (Mosk); 2004; 38(5):756-85. PubMed ID: 15554181
[TBL] [Abstract][Full Text] [Related]
29. Sequence specific interaction of Mycobacterium smegmatis topoisomerase I with duplex DNA.
Bhaduri T; Sikder D; Nagaraja V
Nucleic Acids Res; 1998 Apr; 26(7):1668-74. PubMed ID: 9512537
[TBL] [Abstract][Full Text] [Related]
30. Structure of homeodomain-leucine zipper/DNA complexes studied using hydroxyl radical cleavage of DNA and methylation interference.
Tron AE; Comelli RN; Gonzalez DH
Biochemistry; 2005 Dec; 44(51):16796-803. PubMed ID: 16363793
[TBL] [Abstract][Full Text] [Related]
31. The RecBCD enzyme initiation complex for DNA unwinding: enzyme positioning and DNA opening.
Farah JA; Smith GR
J Mol Biol; 1997 Oct; 272(5):699-715. PubMed ID: 9368652
[TBL] [Abstract][Full Text] [Related]
32. DNA distortion as a factor in nucleosome positioning.
Fitzgerald DJ; Anderson JN
J Mol Biol; 1999 Oct; 293(3):477-91. PubMed ID: 10543944
[TBL] [Abstract][Full Text] [Related]
33. Combinatorial determination of sequence specificity for nanomolar DNA-binding hairpin polyamides.
Vashisht Gopal YN; Van Dyke MW
Biochemistry; 2003 Jun; 42(22):6891-903. PubMed ID: 12779344
[TBL] [Abstract][Full Text] [Related]
34. Positively charged residues in DNA-binding domains of structural proteins follow sequence-specific positions of DNA phosphate groups.
Cherstvy AG
J Phys Chem B; 2009 Apr; 113(13):4242-7. PubMed ID: 19256532
[TBL] [Abstract][Full Text] [Related]
35. Cooperative dimerization of a heterocyclic diamidine determines sequence-specific DNA recognition.
Tanious F; Wilson WD; Wang L; Kumar A; Boykin DW; Marty C; Baldeyrou B; Bailly C
Biochemistry; 2003 Nov; 42(46):13576-86. PubMed ID: 14622004
[TBL] [Abstract][Full Text] [Related]
36. Molecular requirements for duplex recognition and cleavage by eukaryotic RNase III: discovery of an RNA-dependent DNA cleavage activity of yeast Rnt1p.
Lamontagne B; Hannoush RN; Damha MJ; Abou Elela S
J Mol Biol; 2004 Apr; 338(2):401-18. PubMed ID: 15066440
[TBL] [Abstract][Full Text] [Related]
37. Rearrangement of side-chains in a Zif268 mutant highlights the complexities of zinc finger-DNA recognition.
Miller JC; Pabo CO
J Mol Biol; 2001 Oct; 313(2):309-15. PubMed ID: 11800559
[TBL] [Abstract][Full Text] [Related]
38. DNA sequence recognition by a novel series of minor groove-binding ligands.
Fox KR; Yan Y; Gong B
Anticancer Drug Des; 1999 Jun; 14(3):219-30. PubMed ID: 10500497
[TBL] [Abstract][Full Text] [Related]
39. Transcriptional repressor CcpN from Bacillus subtilis compensates asymmetric contact distribution by cooperative binding.
Licht A; Brantl S
J Mol Biol; 2006 Dec; 364(3):434-48. PubMed ID: 17011578
[TBL] [Abstract][Full Text] [Related]
40. Non-cognate enzyme-DNA complex: structural and kinetic analysis of EcoRV endonuclease bound to the EcoRI recognition site GAATTC.
Hiller DA; Rodriguez AM; Perona JJ
J Mol Biol; 2005 Nov; 354(1):121-36. PubMed ID: 16236314
[TBL] [Abstract][Full Text] [Related]
[Previous] [Next] [New Search]
