BIOMARKERS

Molecular Biopsy of Human Tumors

- a resource for Precision Medicine *

54 related articles for article (PubMed ID: 11677626)

  • 1. Assessing variability by joint sampling of alignments and mutation rates.
    Metzler D; Fleissner R; Wakolbinger A; von Haeseler A
    J Mol Evol; 2001 Dec; 53(6):660-9. PubMed ID: 11677626
    [TBL] [Abstract][Full Text] [Related]  

  • 2. Ancestral sequence alignment under optimal conditions.
    Hudek AK; Brown DG
    BMC Bioinformatics; 2005 Nov; 6():273. PubMed ID: 16293191
    [TBL] [Abstract][Full Text] [Related]  

  • 3. Empirical models for substitution in ribosomal RNA.
    Smith AD; Lui TW; Tillier ER
    Mol Biol Evol; 2004 Mar; 21(3):419-27. PubMed ID: 14660689
    [TBL] [Abstract][Full Text] [Related]  

  • 4. Inferring nonneutral evolution from human-chimp-mouse orthologous gene trios.
    Clark AG; Glanowski S; Nielsen R; Thomas PD; Kejariwal A; Todd MA; Tanenbaum DM; Civello D; Lu F; Murphy B; Ferriera S; Wang G; Zheng X; White TJ; Sninsky JJ; Adams MD; Cargill M
    Science; 2003 Dec; 302(5652):1960-3. PubMed ID: 14671302
    [TBL] [Abstract][Full Text] [Related]  

  • 5. Simultaneous statistical multiple alignment and phylogeny reconstruction.
    Fleissner R; Metzler D; von Haeseler A
    Syst Biol; 2005 Aug; 54(4):548-61. PubMed ID: 16085574
    [TBL] [Abstract][Full Text] [Related]  

  • 6. Nonneutral evolution of the transcribed pseudogene Makorin1-p1 in mice.
    Podlaha O; Zhang J
    Mol Biol Evol; 2004 Dec; 21(12):2202-9. PubMed ID: 15306660
    [TBL] [Abstract][Full Text] [Related]  

  • 7. A context dependent pair hidden Markov model for statistical alignment.
    Arribas-Gil A; Matias C
    Stat Appl Genet Mol Biol; 2012 Jan; 11(1):Article 5. PubMed ID: 22499681
    [TBL] [Abstract][Full Text] [Related]  

  • 8. Toward an accurate statistics of gapped alignments.
    Kschischo M; Lässig M; Yu YK
    Bull Math Biol; 2005 Jan; 67(1):169-91. PubMed ID: 15691544
    [TBL] [Abstract][Full Text] [Related]  

  • 9. Glucocerebrosidase recombinant allele: molecular evolution of the glucocerebrosidase gene and pseudogene in primates.
    Wafaei JR; Choy FY
    Blood Cells Mol Dis; 2005; 35(2):277-85. PubMed ID: 16102985
    [TBL] [Abstract][Full Text] [Related]  

  • 10. Statistical alignment based on fragment insertion and deletion models.
    Metzler D
    Bioinformatics; 2003 Mar; 19(4):490-9. PubMed ID: 12611804
    [TBL] [Abstract][Full Text] [Related]  

  • 11. A "Long Indel" model for evolutionary sequence alignment.
    Miklós I; Lunter GA; Holmes I
    Mol Biol Evol; 2004 Mar; 21(3):529-40. PubMed ID: 14694074
    [TBL] [Abstract][Full Text] [Related]  

  • 12. Statistical alignment of retropseudogenes and their functional paralogs.
    Csurös M; Miklós I
    Mol Biol Evol; 2005 Dec; 22(12):2457-71. PubMed ID: 16107591
    [TBL] [Abstract][Full Text] [Related]  

  • 13. Finding the biologically optimal alignment of multiple sequences.
    Mamitsuka H
    Artif Intell Med; 2005; 35(1-2):9-18. PubMed ID: 16051477
    [TBL] [Abstract][Full Text] [Related]  

  • 14. Scoredist: a simple and robust protein sequence distance estimator.
    Sonnhammer EL; Hollich V
    BMC Bioinformatics; 2005 Apr; 6():108. PubMed ID: 15857510
    [TBL] [Abstract][Full Text] [Related]  

  • 15. Rapid and accurate large-scale coestimation of sequence alignments and phylogenetic trees.
    Liu K; Raghavan S; Nelesen S; Linder CR; Warnow T
    Science; 2009 Jun; 324(5934):1561-4. PubMed ID: 19541996
    [TBL] [Abstract][Full Text] [Related]  

  • 16. A comparison of scoring functions for protein sequence profile alignment.
    Edgar RC; Sjölander K
    Bioinformatics; 2004 May; 20(8):1301-8. PubMed ID: 14962936
    [TBL] [Abstract][Full Text] [Related]  

  • 17. Estimation of reversible substitution matrices from multiple pairs of sequences.
    Arvestad L; Bruno WJ
    J Mol Evol; 1997 Dec; 45(6):696-703. PubMed ID: 9419247
    [TBL] [Abstract][Full Text] [Related]  

  • 18. Joint Bayesian estimation of alignment and phylogeny.
    Redelings BD; Suchard MA
    Syst Biol; 2005 Jun; 54(3):401-18. PubMed ID: 16012107
    [TBL] [Abstract][Full Text] [Related]  

  • 19. RNA secondary structural alignment with conditional random fields.
    Sato K; Sakakibara Y
    Bioinformatics; 2005 Sep; 21 Suppl 2():ii237-42. PubMed ID: 16204111
    [TBL] [Abstract][Full Text] [Related]  

  • 20. Impact of taxon sampling on the estimation of rates of evolution at sites.
    Blouin C; Butt D; Roger AJ
    Mol Biol Evol; 2005 Mar; 22(3):784-91. PubMed ID: 15590908
    [TBL] [Abstract][Full Text] [Related]  

    [Next]    [New Search]
    of 3.