These tools will no longer be maintained as of December 31, 2024. Archived website can be found here. PubMed4Hh GitHub repository can be found here. Contact NLM Customer Service if you have questions.


BIOMARKERS

Molecular Biopsy of Human Tumors

- a resource for Precision Medicine *

247 related articles for article (PubMed ID: 11705368)

  • 1. A molecular movie at 1.8 A resolution displays the photocycle of photoactive yellow protein, a eubacterial blue-light receptor, from nanoseconds to seconds.
    Ren Z; Perman B; Srajer V; Teng TY; Pradervand C; Bourgeois D; Schotte F; Ursby T; Kort R; Wulff M; Moffat K
    Biochemistry; 2001 Nov; 40(46):13788-801. PubMed ID: 11705368
    [TBL] [Abstract][Full Text] [Related]  

  • 2. Photoinduced isomerization of the photoactive yellow protein (PYP) chromophore: interplay of two torsions, a HOOP mode and hydrogen bonding.
    Gromov EV; Burghardt I; Köppel H; Cederbaum LS
    J Phys Chem A; 2011 Aug; 115(33):9237-48. PubMed ID: 21744877
    [TBL] [Abstract][Full Text] [Related]  

  • 3. Chromophore conformation and the evolution of tertiary structural changes in photoactive yellow protein.
    Anderson S; Srajer V; Pahl R; Rajagopal S; Schotte F; Anfinrud P; Wulff M; Moffat K
    Structure; 2004 Jun; 12(6):1039-45. PubMed ID: 15274923
    [TBL] [Abstract][Full Text] [Related]  

  • 4. Ultrafast infrared spectroscopy reveals a key step for successful entry into the photocycle for photoactive yellow protein.
    van Wilderen LJ; van der Horst MA; van Stokkum IH; Hellingwerf KJ; van Grondelle R; Groot ML
    Proc Natl Acad Sci U S A; 2006 Oct; 103(41):15050-5. PubMed ID: 17015839
    [TBL] [Abstract][Full Text] [Related]  

  • 5. Molecular dynamics simulations of photoactive yellow protein (PYP) in three states of its photocycle: a comparison with X-ray and NMR data and analysis of the effects of Glu46 deprotonation and mutation.
    Antes I; Thiel W; van Gunsteren WF
    Eur Biophys J; 2002 Dec; 31(7):504-20. PubMed ID: 12451420
    [TBL] [Abstract][Full Text] [Related]  

  • 6. Hydrogen-bond network probed by time-resolved optoacoustic spectroscopy: photoactive yellow protein and the effect of E46Q and E46A mutations.
    Losi A; Gensch T; van der Horst MA; Hellingwerf KJ; Braslavsky SE
    Phys Chem Chem Phys; 2005 May; 7(10):2229-36. PubMed ID: 19791418
    [TBL] [Abstract][Full Text] [Related]  

  • 7. Distinguishing chromophore structures of photocycle intermediates of the photoreceptor PYP by transient fluorescence and energy transfer.
    Hoersch D; Otto H; Cusanovich MA; Heyn MP
    J Phys Chem B; 2008 Jul; 112(30):9118-25. PubMed ID: 18605685
    [TBL] [Abstract][Full Text] [Related]  

  • 8. Characterization of photocycle intermediates in crystalline photoactive yellow protein.
    Kort R; Ravelli RB; Schotte F; Bourgeois D; Crielaard W; Hellingwerf KJ; Wulff M
    Photochem Photobiol; 2003 Aug; 78(2):131-7. PubMed ID: 12945580
    [TBL] [Abstract][Full Text] [Related]  

  • 9. pH Dependence of the photoactive yellow protein photocycle recovery reaction reveals a new late photocycle intermediate with a deprotonated chromophore.
    Hendriks J; Hellingwerf KJ
    J Biol Chem; 2009 Feb; 284(8):5277-88. PubMed ID: 19091750
    [TBL] [Abstract][Full Text] [Related]  

  • 10. Time-resolved single tryptophan fluorescence in photoactive yellow protein monitors changes in the chromophore structure during the photocycle via energy transfer.
    Otto H; Hoersch D; Meyer TE; Cusanovich MA; Heyn MP
    Biochemistry; 2005 Dec; 44(51):16804-16. PubMed ID: 16363794
    [TBL] [Abstract][Full Text] [Related]  

  • 11. Visible-light-induced photodimerization of a photoactive yellow protein (PYP) chromophore model in a single crystal.
    Nath NK; Manoj K; Gâz AŞ; Naumov P
    Chemistry; 2013 Jun; 19(25):8094-9. PubMed ID: 23616177
    [TBL] [Abstract][Full Text] [Related]  

  • 12. Short hydrogen bonds in photoactive yellow protein.
    Anderson S; Crosson S; Moffat K
    Acta Crystallogr D Biol Crystallogr; 2004 Jun; 60(Pt 6):1008-16. PubMed ID: 15159559
    [TBL] [Abstract][Full Text] [Related]  

  • 13. Stress tensor analysis of the protein quake of photoactive yellow protein.
    Koike K; Kawaguchi K; Yamato T
    Phys Chem Chem Phys; 2008 Mar; 10(10):1400-5. PubMed ID: 18309395
    [TBL] [Abstract][Full Text] [Related]  

  • 14. Predicting the signaling state of photoactive yellow protein.
    Vreede J; Crielaard W; Hellingwerf KJ; Bolhuis PG
    Biophys J; 2005 May; 88(5):3525-35. PubMed ID: 15722437
    [TBL] [Abstract][Full Text] [Related]  

  • 15. Structural heterogeneity of cryotrapped intermediates in the bacterial blue light photoreceptor, photoactive yellow protein.
    Anderson S; Srajer V; Moffat K
    Photochem Photobiol; 2004; 80():7-14. PubMed ID: 15339224
    [TBL] [Abstract][Full Text] [Related]  

  • 16. Initial events in the photocycle of photoactive yellow protein.
    Kort R; Hellingwerf KJ; Ravelli RB
    J Biol Chem; 2004 Jun; 279(25):26417-24. PubMed ID: 15026418
    [TBL] [Abstract][Full Text] [Related]  

  • 17. Structure of the I1 early intermediate of photoactive yellow protein by FTIR spectroscopy.
    Brudler R; Rammelsberg R; Woo TT; Getzoff ED; Gerwert K
    Nat Struct Biol; 2001 Mar; 8(3):265-70. PubMed ID: 11224574
    [TBL] [Abstract][Full Text] [Related]  

  • 18. Dual photoactive species in Glu46Asp and Glu46Ala mutants of photoactive yellow protein: a pH-driven color transition.
    Devanathan S; Brudler R; Hessling B; Woo TT; Gerwert K; Getzoff ED; Cusanovich MA; Tollin G
    Biochemistry; 1999 Oct; 38(41):13766-72. PubMed ID: 10521284
    [TBL] [Abstract][Full Text] [Related]  

  • 19. Excitation-Wavelength-Dependent Photocycle Initiation Dynamics Resolve Heterogeneity in the Photoactive Yellow Protein from Halorhodospira halophila.
    Mix LT; Carroll EC; Morozov D; Pan J; Gordon WR; Philip A; Fuzell J; Kumauchi M; van Stokkum I; Groenhof G; Hoff WD; Larsen DS
    Biochemistry; 2018 Mar; 57(11):1733-1747. PubMed ID: 29465990
    [TBL] [Abstract][Full Text] [Related]  

  • 20. A structural pathway for signaling in the E46Q mutant of photoactive yellow protein.
    Rajagopal S; Anderson S; Srajer V; Schmidt M; Pahl R; Moffat K
    Structure; 2005 Jan; 13(1):55-63. PubMed ID: 15642261
    [TBL] [Abstract][Full Text] [Related]  

    [Next]    [New Search]
    of 13.