1635 related articles for article (PubMed ID: 11734060)
21. Search for a 'Tree of Life' in the thicket of the phylogenetic forest.
Puigbò P; Wolf YI; Koonin EV
J Biol; 2009; 8(6):59. PubMed ID: 19594957
[TBL] [Abstract][Full Text] [Related]
22. Updated clusters of orthologous genes for Archaea: a complex ancestor of the Archaea and the byways of horizontal gene transfer.
Wolf YI; Makarova KS; Yutin N; Koonin EV
Biol Direct; 2012 Dec; 7():46. PubMed ID: 23241446
[TBL] [Abstract][Full Text] [Related]
23. Genomics of bacteria and archaea: the emerging dynamic view of the prokaryotic world.
Koonin EV; Wolf YI
Nucleic Acids Res; 2008 Dec; 36(21):6688-719. PubMed ID: 18948295
[TBL] [Abstract][Full Text] [Related]
24. Telling the whole story in a 10,000-genome world.
Beiko RG
Biol Direct; 2011 Jun; 6():34. PubMed ID: 21714939
[TBL] [Abstract][Full Text] [Related]
25. Alternative methods for concatenation of core genes indicate a lack of resolution in deep nodes of the prokaryotic phylogeny.
Bapteste E; Susko E; Leigh J; Ruiz-Trillo I; Bucknam J; Doolittle WF
Mol Biol Evol; 2008 Jan; 25(1):83-91. PubMed ID: 17940208
[TBL] [Abstract][Full Text] [Related]
26. A new fast method for inferring multiple consensus trees using k-medoids.
Tahiri N; Willems M; Makarenkov V
BMC Evol Biol; 2018 Apr; 18(1):48. PubMed ID: 29621975
[TBL] [Abstract][Full Text] [Related]
27. An emerging phylogenetic core of Archaea: phylogenies of transcription and translation machineries converge following addition of new genome sequences.
Brochier C; Forterre P; Gribaldo S
BMC Evol Biol; 2005 Jun; 5():36. PubMed ID: 15932645
[TBL] [Abstract][Full Text] [Related]
28. Universal trees based on large combined protein sequence data sets.
Brown JR; Douady CJ; Italia MJ; Marshall WE; Stanhope MJ
Nat Genet; 2001 Jul; 28(3):281-5. PubMed ID: 11431701
[TBL] [Abstract][Full Text] [Related]
29. Two C or not two C: recurrent disruption of Zn-ribbons, gene duplication, lineage-specific gene loss, and horizontal gene transfer in evolution of bacterial ribosomal proteins.
Makarova KS; Ponomarev VA; Koonin EV
Genome Biol; 2001; 2(9):RESEARCH 0033. PubMed ID: 11574053
[TBL] [Abstract][Full Text] [Related]
30. AnnoTree: visualization and exploration of a functionally annotated microbial tree of life.
Mendler K; Chen H; Parks DH; Lobb B; Hug LA; Doxey AC
Nucleic Acids Res; 2019 May; 47(9):4442-4448. PubMed ID: 31081040
[TBL] [Abstract][Full Text] [Related]
31. Archaeal phylogeny based on proteins of the transcription and translation machineries: tackling the Methanopyrus kandleri paradox.
Brochier C; Forterre P; Gribaldo S
Genome Biol; 2004; 5(3):R17. PubMed ID: 15003120
[TBL] [Abstract][Full Text] [Related]
32. Horizontal gene transfer of zinc and non-zinc forms of bacterial ribosomal protein S4.
Chen K; Roberts E; Luthey-Schulten Z
BMC Evol Biol; 2009 Jul; 9():179. PubMed ID: 19640295
[TBL] [Abstract][Full Text] [Related]
33. Phylogenomic dating--a method of constraining the age of microbial taxa that lack a conventional fossil record.
Blank CE
Astrobiology; 2009 Mar; 9(2):173-91. PubMed ID: 19371160
[TBL] [Abstract][Full Text] [Related]
34. The structure and evolution of the ribosomal proteins encoded in the spc operon of the archaeon (Crenarchaeota) Sulfolobus acidocaldarius.
Yang D; Kusser I; Köpke AK; Koop BF; Matheson AT
Mol Phylogenet Evol; 1999 Jul; 12(2):177-85. PubMed ID: 10381320
[TBL] [Abstract][Full Text] [Related]
35. Distribution of nitrogen fixation and nitrogenase-like sequences amongst microbial genomes.
Dos Santos PC; Fang Z; Mason SW; Setubal JC; Dixon R
BMC Genomics; 2012 May; 13():162. PubMed ID: 22554235
[TBL] [Abstract][Full Text] [Related]
36. Evolution of aminoacyl-tRNA synthetases--analysis of unique domain architectures and phylogenetic trees reveals a complex history of horizontal gene transfer events.
Wolf YI; Aravind L; Grishin NV; Koonin EV
Genome Res; 1999 Aug; 9(8):689-710. PubMed ID: 10447505
[TBL] [Abstract][Full Text] [Related]
37. Distant horizontal gene transfer is rare for multiple families of prokaryotic insertion sequences.
Wagner A; de la Chaux N
Mol Genet Genomics; 2008 Nov; 280(5):397-408. PubMed ID: 18751731
[TBL] [Abstract][Full Text] [Related]
38. Prokaryotic genomes: the emerging paradigm of genome-based microbiology.
Koonin EV; Galperin MY
Curr Opin Genet Dev; 1997 Dec; 7(6):757-63. PubMed ID: 9468784
[TBL] [Abstract][Full Text] [Related]
39. Phyletic Distribution and Lineage-Specific Domain Architectures of Archaeal Two-Component Signal Transduction Systems.
Galperin MY; Makarova KS; Wolf YI; Koonin EV
J Bacteriol; 2018 Apr; 200(7):. PubMed ID: 29263101
[TBL] [Abstract][Full Text] [Related]
40. Extensive horizontal transfer of core genome genes between two Lactobacillus species found in the gastrointestinal tract.
Nicolas P; Bessières P; Ehrlich SD; Maguin E; van de Guchte M
BMC Evol Biol; 2007 Aug; 7():141. PubMed ID: 17708761
[TBL] [Abstract][Full Text] [Related]
[Previous] [Next] [New Search]
