These tools will no longer be maintained as of December 31, 2024. Archived website can be found here. PubMed4Hh GitHub repository can be found here. Contact NLM Customer Service if you have questions.


BIOMARKERS

Molecular Biopsy of Human Tumors

- a resource for Precision Medicine *

396 related articles for article (PubMed ID: 11801179)

  • 1. Noncoding RNA gene detection using comparative sequence analysis.
    Rivas E; Eddy SR
    BMC Bioinformatics; 2001; 2():8. PubMed ID: 11801179
    [TBL] [Abstract][Full Text] [Related]  

  • 2. Pair hidden Markov models on tree structures.
    Sakakibara Y
    Bioinformatics; 2003; 19 Suppl 1():i232-40. PubMed ID: 12855464
    [TBL] [Abstract][Full Text] [Related]  

  • 3. Pair stochastic tree adjoining grammars for aligning and predicting pseudoknot RNA structures.
    Matsui H; Sato K; Sakakibara Y
    Proc IEEE Comput Syst Bioinform Conf; 2004; ():290-9. PubMed ID: 16448022
    [TBL] [Abstract][Full Text] [Related]  

  • 4. Computational identification of noncoding RNAs in E. coli by comparative genomics.
    Rivas E; Klein RJ; Jones TA; Eddy SR
    Curr Biol; 2001 Sep; 11(17):1369-73. PubMed ID: 11553332
    [TBL] [Abstract][Full Text] [Related]  

  • 5. Detection of non-coding RNAs on the basis of predicted secondary structure formation free energy change.
    Uzilov AV; Keegan JM; Mathews DH
    BMC Bioinformatics; 2006 Mar; 7():173. PubMed ID: 16566836
    [TBL] [Abstract][Full Text] [Related]  

  • 6. Prediction of structured non-coding RNAs in the genomes of the nematodes Caenorhabditis elegans and Caenorhabditis briggsae.
    Missal K; Zhu X; Rose D; Deng W; Skogerbø G; Chen R; Stadler PF
    J Exp Zool B Mol Dev Evol; 2006 Jul; 306(4):379-92. PubMed ID: 16425273
    [TBL] [Abstract][Full Text] [Related]  

  • 7. Evolutionary models for insertions and deletions in a probabilistic modeling framework.
    Rivas E
    BMC Bioinformatics; 2005 Mar; 6():63. PubMed ID: 15780137
    [TBL] [Abstract][Full Text] [Related]  

  • 8. Prediction of small, noncoding RNAs in bacteria using heterogeneous data.
    Tjaden B
    J Math Biol; 2008 Jan; 56(1-2):183-200. PubMed ID: 17354017
    [TBL] [Abstract][Full Text] [Related]  

  • 9. Patterns of flanking sequence conservation and a characteristic upstream motif for microRNA gene identification.
    Ohler U; Yekta S; Lim LP; Bartel DP; Burge CB
    RNA; 2004 Sep; 10(9):1309-22. PubMed ID: 15317971
    [TBL] [Abstract][Full Text] [Related]  

  • 10. Benchmarking tools for the alignment of functional noncoding DNA.
    Pollard DA; Bergman CM; Stoye J; Celniker SE; Eisen MB
    BMC Bioinformatics; 2004 Jan; 5():6. PubMed ID: 14736341
    [TBL] [Abstract][Full Text] [Related]  

  • 11. A grammar based methodology for structural motif finding in ncRNA database search.
    Quest D; Tapprich W; Ali H
    Comput Syst Bioinformatics Conf; 2007; 6():215-25. PubMed ID: 17951826
    [TBL] [Abstract][Full Text] [Related]  

  • 12. Accelerated probabilistic inference of RNA structure evolution.
    Holmes I
    BMC Bioinformatics; 2005 Mar; 6():73. PubMed ID: 15790387
    [TBL] [Abstract][Full Text] [Related]  

  • 13. Pair stochastic tree adjoining grammars for aligning and predicting pseudoknot RNA structures.
    Matsui H; Sato K; Sakakibara Y
    Bioinformatics; 2005 Jun; 21(11):2611-7. PubMed ID: 15784748
    [TBL] [Abstract][Full Text] [Related]  

  • 14. Considerations in the identification of functional RNA structural elements in genomic alignments.
    Babak T; Blencowe BJ; Hughes TR
    BMC Bioinformatics; 2007 Jan; 8():33. PubMed ID: 17263882
    [TBL] [Abstract][Full Text] [Related]  

  • 15. Specific alignment of structured RNA: stochastic grammars and sequence annealing.
    Bradley RK; Pachter L; Holmes I
    Bioinformatics; 2008 Dec; 24(23):2677-83. PubMed ID: 18796475
    [TBL] [Abstract][Full Text] [Related]  

  • 16. The microRNAs of Caenorhabditis elegans.
    Lim LP; Lau NC; Weinstein EG; Abdelhakim A; Yekta S; Rhoades MW; Burge CB; Bartel DP
    Genes Dev; 2003 Apr; 17(8):991-1008. PubMed ID: 12672692
    [TBL] [Abstract][Full Text] [Related]  

  • 17. C. elegans noncoding RNA genes.
    Stricklin SL; Griffiths-Jones S; Eddy SR
    WormBook; 2005 Jun; ():1-7. PubMed ID: 18023116
    [TBL] [Abstract][Full Text] [Related]  

  • 18. Evolutionary triplet models of structured RNA.
    Bradley RK; Holmes I
    PLoS Comput Biol; 2009 Aug; 5(8):e1000483. PubMed ID: 19714212
    [TBL] [Abstract][Full Text] [Related]  

  • 19. ddbRNA: detection of conserved secondary structures in multiple alignments.
    di Bernardo D; Down T; Hubbard T
    Bioinformatics; 2003 Sep; 19(13):1606-11. PubMed ID: 12967955
    [TBL] [Abstract][Full Text] [Related]  

  • 20. RNA secondary structural alignment with conditional random fields.
    Sato K; Sakakibara Y
    Bioinformatics; 2005 Sep; 21 Suppl 2():ii237-42. PubMed ID: 16204111
    [TBL] [Abstract][Full Text] [Related]  

    [Next]    [New Search]
    of 20.