These tools will no longer be maintained as of December 31, 2024. Archived website can be found here. PubMed4Hh GitHub repository can be found here. Contact NLM Customer Service if you have questions.


BIOMARKERS

Molecular Biopsy of Human Tumors

- a resource for Precision Medicine *

199 related articles for article (PubMed ID: 11809890)

  • 1. Imino proton NMR analysis of HDV ribozymes: nested double pseudoknot structure and Mg2+ ion-binding site close to the catalytic core in solution.
    Tanaka Y; Hori T; Tagaya M; Sakamoto T; Kurihara Y; Katahira M; Uesugi S
    Nucleic Acids Res; 2002 Feb; 30(3):766-74. PubMed ID: 11809890
    [TBL] [Abstract][Full Text] [Related]  

  • 2. NMR analysis of tertiary interactions in HDV ribozymes.
    Tanaka Y; Hori T; Tagaya M; Katahira M; Nishikawa F; Sakamoto T; Kurihara Y; Nishikawa S; Uesugi S
    Nucleic Acids Symp Ser; 2000; (44):285-6. PubMed ID: 12903380
    [TBL] [Abstract][Full Text] [Related]  

  • 3. Design and NMR analysis of HDV ribozymes for structural investigation.
    Tanaka Y; Hori T; Katahira M; Nishikawa F; Sakamoto T; Fukunaga Y; Kurihara Y; Nishikawa S; Uesugi S
    Nucleic Acids Symp Ser; 1999; (42):221-2. PubMed ID: 10780459
    [TBL] [Abstract][Full Text] [Related]  

  • 4. Cleavage reaction of HDV ribozymes in the presence of Mg2+ is accompanied by a conformational change.
    Tanaka Y; Tagaya M; Hori T; Sakamoto T; Kurihara Y; Katahira M; Uesugi S
    Genes Cells; 2002 Jun; 7(6):567-79. PubMed ID: 12059960
    [TBL] [Abstract][Full Text] [Related]  

  • 5. A nested double pseudoknot is required for self-cleavage activity of both the genomic and antigenomic hepatitis delta virus ribozymes.
    Wadkins TS; Perrotta AT; Ferré-D'Amaré AR; Doudna JA; Been MD
    RNA; 1999 Jun; 5(6):720-7. PubMed ID: 10376872
    [TBL] [Abstract][Full Text] [Related]  

  • 6. Terbium-mediated footprinting probes a catalytic conformational switch in the antigenomic hepatitis delta virus ribozyme.
    Harris DA; Tinsley RA; Walter NG
    J Mol Biol; 2004 Aug; 341(2):389-403. PubMed ID: 15276831
    [TBL] [Abstract][Full Text] [Related]  

  • 7. Mechanistic characterization of the HDV genomic ribozyme: the cleavage site base pair plays a structural role in facilitating catalysis.
    Cerrone-Szakal AL; Chadalavada DM; Golden BL; Bevilacqua PC
    RNA; 2008 Sep; 14(9):1746-60. PubMed ID: 18658121
    [TBL] [Abstract][Full Text] [Related]  

  • 8. Formation of the P1.1 pseudoknot is critical for both the cleavage activity and substrate specificity of an antigenomic trans-acting hepatitis delta ribozyme.
    Deschênes P; Ouellet J; Perreault J; Perreault JP
    Nucleic Acids Res; 2003 Apr; 31(8):2087-96. PubMed ID: 12682359
    [TBL] [Abstract][Full Text] [Related]  

  • 9. A pH-sensitive RNA tertiary interaction affects self-cleavage activity of the HDV ribozymes in the absence of added divalent metal ion.
    Wadkins TS; Shih I; Perrotta AT; Been MD
    J Mol Biol; 2001 Feb; 305(5):1045-55. PubMed ID: 11162113
    [TBL] [Abstract][Full Text] [Related]  

  • 10. Presence of a coordinated metal ion in a trans-acting antigenomic delta ribozyme.
    Lafontaine DA; Ananvoranich S; Perreault JP
    Nucleic Acids Res; 1999 Aug; 27(15):3236-43. PubMed ID: 10454623
    [TBL] [Abstract][Full Text] [Related]  

  • 11. Addition of an extra substrate binding site and partial destabilization of stem structures in HDV ribozyme give rise to high sequence-specificity for its target RNA.
    Hori T; Guo F; Uesugi S
    Nucleosides Nucleotides Nucleic Acids; 2006; 25(4-6):489-501. PubMed ID: 16838841
    [TBL] [Abstract][Full Text] [Related]  

  • 12. A novel structural rearrangement of hepatitis delta virus antigenomic ribozyme.
    Nehdi A; Perreault J; Beaudoin JD; Perreault JP
    Nucleic Acids Res; 2007; 35(20):6820-31. PubMed ID: 17933779
    [TBL] [Abstract][Full Text] [Related]  

  • 13. Site-specific modification of functional groups in genomic hepatitis delta virus (HDV) ribozyme.
    Nishikawa F; Shirai M; Nishikawa S
    Eur J Biochem; 2002 Dec; 269(23):5792-803. PubMed ID: 12444967
    [TBL] [Abstract][Full Text] [Related]  

  • 14. Importance of short pseudoknot base pairs between two single-stranded regions of HDV ribozyme.
    Nishikawa F; Shirai M; Nishikawa S
    Nucleic Acids Symp Ser; 1999; (42):287-8. PubMed ID: 10780492
    [TBL] [Abstract][Full Text] [Related]  

  • 15. In vitro selection analysis of trans-acting HDV ribozyme.
    Nishikawa F; Chiba A; Shirai M; Fauzi H; Taira K; Kumar PK; Nishikawa S
    Nucleic Acids Symp Ser; 1995; (34):115-6. PubMed ID: 8841579
    [TBL] [Abstract][Full Text] [Related]  

  • 16. The folding pathway of the genomic hepatitis delta virus ribozyme is dominated by slow folding of the pseudoknots.
    Chadalavada DM; Senchak SE; Bevilacqua PC
    J Mol Biol; 2002 Apr; 317(4):559-75. PubMed ID: 11955009
    [TBL] [Abstract][Full Text] [Related]  

  • 17. Long-range impact of peripheral joining elements on structure and function of the hepatitis delta virus ribozyme.
    Tinsley RA; Walter NG
    Biol Chem; 2007 Jul; 388(7):705-15. PubMed ID: 17570823
    [TBL] [Abstract][Full Text] [Related]  

  • 18. Requirement for canonical base pairing in the short pseudoknot structure of genomic hepatitis delta virus ribozyme.
    Nishikawa F; Nishikawa S
    Nucleic Acids Res; 2000 Feb; 28(4):925-31. PubMed ID: 10648784
    [TBL] [Abstract][Full Text] [Related]  

  • 19. [Properties of antigenomic HDV ribozyme consisting of two RNA chains].
    Alekseenkova VA; Belianko TI; Lukin MA; Savichkina LP; Bibilashvili RSh
    Mol Biol (Mosk); 2004; 38(6):1050-8. PubMed ID: 15612593
    [TBL] [Abstract][Full Text] [Related]  

  • 20. Hepatitis delta virus ribozymes fold to generate a solvent-inaccessible core with essential nucleotides near the cleavage site phosphate.
    Rosenstein SP; Been MD
    Biochemistry; 1996 Sep; 35(35):11403-13. PubMed ID: 8784196
    [TBL] [Abstract][Full Text] [Related]  

    [Next]    [New Search]
    of 10.