198 related articles for article (PubMed ID: 11812262)
1. Conformation and dynamics of normal and damaged DNA.
Rachofsky EL; Ross JB; Osman R
Comb Chem High Throughput Screen; 2001 Dec; 4(8):675-706. PubMed ID: 11812262
[TBL] [Abstract][Full Text] [Related]
2. Conformation and dynamics of abasic sites in DNA investigated by time-resolved fluorescence of 2-aminopurine.
Rachofsky EL; Seibert E; Stivers JT; Osman R; Ross JB
Biochemistry; 2001 Jan; 40(4):957-67. PubMed ID: 11170417
[TBL] [Abstract][Full Text] [Related]
3. Probing structure and dynamics of DNA with 2-aminopurine: effects of local environment on fluorescence.
Rachofsky EL; Osman R; Ross JB
Biochemistry; 2001 Jan; 40(4):946-56. PubMed ID: 11170416
[TBL] [Abstract][Full Text] [Related]
4. Structure and dynamics in DNA looped domains: CAG triplet repeat sequence dynamics probed by 2-aminopurine fluorescence.
Lee BJ; Barch M; Castner EW; Völker J; Breslauer KJ
Biochemistry; 2007 Sep; 46(38):10756-66. PubMed ID: 17718541
[TBL] [Abstract][Full Text] [Related]
5. 2-Aminopurine fluorescence quenching and lifetimes: role of base stacking.
Jean JM; Hall KB
Proc Natl Acad Sci U S A; 2001 Jan; 98(1):37-41. PubMed ID: 11120885
[TBL] [Abstract][Full Text] [Related]
6. Steady-state and time-resolved fluorescence studies indicate an unusual conformation of 2-aminopurine within ATAT and TATA duplex DNA sequences.
Rai P; Cole TD; Thompson E; Millar DP; Linn S
Nucleic Acids Res; 2003 May; 31(9):2323-32. PubMed ID: 12711677
[TBL] [Abstract][Full Text] [Related]
7. Heterogeneity and dynamics of the ligand recognition mode in purine-sensing riboswitches.
Jain N; Zhao L; Liu JD; Xia T
Biochemistry; 2010 May; 49(17):3703-14. PubMed ID: 20345178
[TBL] [Abstract][Full Text] [Related]
8. 2-Aminopurine as a fluorescent probe of DNA conformation and the DNA-enzyme interface.
Jones AC; Neely RK
Q Rev Biophys; 2015 May; 48(2):244-79. PubMed ID: 25881643
[TBL] [Abstract][Full Text] [Related]
9. Formation of an intramolecular triple-stranded DNA structure monitored by fluorescence of 2-aminopurine or 6-methylisoxanthopterin.
Shchyolkina AK; Kaluzhny DN; Borisova OF; Hawkins ME; Jernigan RL; Jovin TM; Arndt-Jovin DJ; Zhurkin VB
Nucleic Acids Res; 2004; 32(2):432-40. PubMed ID: 14739235
[TBL] [Abstract][Full Text] [Related]
10. Influence of base stacking and hydrogen bonding on the fluorescence of 2-aminopurine and pyrrolocytosine in nucleic acids.
Hardman SJ; Thompson KC
Biochemistry; 2006 Aug; 45(30):9145-55. PubMed ID: 16866360
[TBL] [Abstract][Full Text] [Related]
11. Conformational dynamics of abasic DNA upon interactions with AP endonuclease 1 revealed by stopped-flow fluorescence analysis.
Kanazhevskaya LY; Koval VV; Vorobjev YN; Fedorova OS
Biochemistry; 2012 Feb; 51(6):1306-21. PubMed ID: 22243137
[TBL] [Abstract][Full Text] [Related]
12. Role of DNA flexibility in sequence-dependent activity of uracil DNA glycosylase.
Seibert E; Ross JB; Osman R
Biochemistry; 2002 Sep; 41(36):10976-84. PubMed ID: 12206669
[TBL] [Abstract][Full Text] [Related]
13. Quantitative sampling of conformational heterogeneity of a DNA hairpin using molecular dynamics simulations and ultrafast fluorescence spectroscopy.
Voltz K; Léonard J; Touceda PT; Conyard J; Chaker Z; Dejaegere A; Godet J; Mély Y; Haacke S; Stote RH
Nucleic Acids Res; 2016 Apr; 44(7):3408-19. PubMed ID: 26896800
[TBL] [Abstract][Full Text] [Related]
14. 2-Aminopurine Fluorescence as a Probe of Local RNA Structure and Dynamics and Global Folding.
Rau MJ; Hall KB
Methods Enzymol; 2015; 558():99-124. PubMed ID: 26068739
[TBL] [Abstract][Full Text] [Related]
15. A selective, noncovalent assay for base flipping in DNA.
O'Neil LL; Wiest O
J Am Chem Soc; 2005 Dec; 127(48):16800-1. PubMed ID: 16316222
[TBL] [Abstract][Full Text] [Related]
16. Binding of EcoP15I DNA methyltransferase to DNA reveals a large structural distortion within the recognition sequence.
Reddy YV; Rao DN
J Mol Biol; 2000 May; 298(4):597-610. PubMed ID: 10788323
[TBL] [Abstract][Full Text] [Related]
17. Low-energy circular dichroism of 2-aminopurine dinucleotide as a probe of local conformation of DNA and RNA.
Johnson NP; Baase WA; Von Hippel PH
Proc Natl Acad Sci U S A; 2004 Mar; 101(10):3426-31. PubMed ID: 14993592
[TBL] [Abstract][Full Text] [Related]
18. Molecular Dynamics Simulations of 2-Aminopurine-Labeled Dinucleoside Monophosphates Reveal Multiscale Stacking Kinetics.
Remington JM; McCullagh M; Kohler B
J Phys Chem B; 2019 Mar; 123(10):2291-2304. PubMed ID: 30767498
[TBL] [Abstract][Full Text] [Related]
19. 2-Aminopurine fluorescence studies of base stacking interactions at abasic sites in DNA: metal-ion and base sequence effects.
Stivers JT
Nucleic Acids Res; 1998 Aug; 26(16):3837-44. PubMed ID: 9685503
[TBL] [Abstract][Full Text] [Related]
20. Fluorescence properties of 8-(2-pyridyl)guanine "2PyG" as compared to 2-aminopurine in DNA.
Dumas A; Luedtke NW
Chembiochem; 2011 Sep; 12(13):2044-51. PubMed ID: 21786378
[TBL] [Abstract][Full Text] [Related]
[Next] [New Search]
