These tools will no longer be maintained as of December 31, 2024. Archived website can be found here. PubMed4Hh GitHub repository can be found here. Contact NLM Customer Service if you have questions.


BIOMARKERS

Molecular Biopsy of Human Tumors

- a resource for Precision Medicine *

146 related articles for article (PubMed ID: 11835489)

  • 1. Predicting novel protein folds by using FRAGFOLD.
    Jones DT
    Proteins; 2001; Suppl 5():127-32. PubMed ID: 11835489
    [TBL] [Abstract][Full Text] [Related]  

  • 2. Assembling novel protein folds from super-secondary structural fragments.
    Jones DT; McGuffin LJ
    Proteins; 2003; 53 Suppl 6():480-5. PubMed ID: 14579336
    [TBL] [Abstract][Full Text] [Related]  

  • 3. Application of PROSPECT in CASP4: characterizing protein structures with new folds.
    Xu D; Crawford OH; LoCascio PF; Xu Y
    Proteins; 2001; Suppl 5():140-8. PubMed ID: 11835491
    [TBL] [Abstract][Full Text] [Related]  

  • 4. CASP2 knowledge-based approach to distant homology recognition and fold prediction in CASP4.
    Murzin AG; Bateman A
    Proteins; 2001; Suppl 5():76-85. PubMed ID: 11835484
    [TBL] [Abstract][Full Text] [Related]  

  • 5. Successful ab initio prediction of the tertiary structure of NK-lysin using multiple sequences and recognized supersecondary structural motifs.
    Jones DT
    Proteins; 1997; Suppl 1():185-91. PubMed ID: 9485510
    [TBL] [Abstract][Full Text] [Related]  

  • 6. Prediction of novel and analogous folds using fragment assembly and fold recognition.
    Jones DT; Bryson K; Coleman A; McGuffin LJ; Sadowski MI; Sodhi JS; Ward JJ
    Proteins; 2005; 61 Suppl 7():143-151. PubMed ID: 16187356
    [TBL] [Abstract][Full Text] [Related]  

  • 7. Assessment of novel fold targets in CASP4: predictions of three-dimensional structures, secondary structures, and interresidue contacts.
    Lesk AM; Lo Conte L; Hubbard TJ
    Proteins; 2001; Suppl 5():98-118. PubMed ID: 11835487
    [TBL] [Abstract][Full Text] [Related]  

  • 8. Folding in lipid membranes (FILM): a novel method for the prediction of small membrane protein 3D structures.
    Pellegrini-Calace M; Carotti A; Jones DT
    Proteins; 2003 Mar; 50(4):537-45. PubMed ID: 12577259
    [TBL] [Abstract][Full Text] [Related]  

  • 9. Assessment of the CASP4 fold recognition category.
    Sippl MJ; Lackner P; Domingues FS; Prlić A; Malik R; Andreeva A; Wiederstein M
    Proteins; 2001; Suppl 5():55-67. PubMed ID: 11835482
    [TBL] [Abstract][Full Text] [Related]  

  • 10. Ab initio protein structure prediction via a combination of threading, lattice folding, clustering, and structure refinement.
    Skolnick J; Kolinski A; Kihara D; Betancourt M; Rotkiewicz P; Boniecki M
    Proteins; 2001; Suppl 5():149-56. PubMed ID: 11835492
    [TBL] [Abstract][Full Text] [Related]  

  • 11. A novel approach to fold recognition using sequence-derived properties from sets of structurally similar local fragments of proteins.
    Hvidsten TR; Kryshtafovych A; Komorowski J; Fidelis K
    Bioinformatics; 2003 Oct; 19 Suppl 2():ii81-91. PubMed ID: 14534176
    [TBL] [Abstract][Full Text] [Related]  

  • 12. Comparative modeling of CASP4 target proteins: combining results of sequence search with three-dimensional structure assessment.
    Venclovas C
    Proteins; 2001; Suppl 5():47-54. PubMed ID: 11835481
    [TBL] [Abstract][Full Text] [Related]  

  • 13. Rosetta in CASP4: progress in ab initio protein structure prediction.
    Bonneau R; Tsai J; Ruczinski I; Chivian D; Rohl C; Strauss CE; Baker D
    Proteins; 2001; Suppl 5():119-26. PubMed ID: 11835488
    [TBL] [Abstract][Full Text] [Related]  

  • 14. Fold recognition from sequence comparisons.
    Koretke KK; Russell RB; Lupas AN
    Proteins; 2001; Suppl 5():68-75. PubMed ID: 11835483
    [TBL] [Abstract][Full Text] [Related]  

  • 15. Fold recognition and ab initio structure predictions using hidden Markov models and beta-strand pair potentials.
    Hubbard TJ; Park J
    Proteins; 1995 Nov; 23(3):398-402. PubMed ID: 8710832
    [TBL] [Abstract][Full Text] [Related]  

  • 16. Supersecondary Structures and Fragment Libraries.
    Trevizani R; Custódio FL
    Methods Mol Biol; 2019; 1958():283-295. PubMed ID: 30945224
    [TBL] [Abstract][Full Text] [Related]  

  • 17. Analysis and assessment of comparative modeling predictions in CASP4.
    Tramontano A; Leplae R; Morea V
    Proteins; 2001; Suppl 5():22-38. PubMed ID: 11835479
    [TBL] [Abstract][Full Text] [Related]  

  • 18. fRMSDPred: predicting local RMSD between structural fragments using sequence information.
    Rangwala H; Karypis G
    Comput Syst Bioinformatics Conf; 2007; 6():311-22. PubMed ID: 17951834
    [TBL] [Abstract][Full Text] [Related]  

  • 19. A practical guide to protein structure prediction.
    Jones DT
    Methods Mol Biol; 2000; 143():131-54. PubMed ID: 11084905
    [No Abstract]   [Full Text] [Related]  

  • 20. Modularity of Protein Folds as a Tool for Template-Free Modeling of Structures.
    Vallat B; Madrid-Aliste C; Fiser A
    PLoS Comput Biol; 2015 Aug; 11(8):e1004419. PubMed ID: 26252221
    [TBL] [Abstract][Full Text] [Related]  

    [Next]    [New Search]
    of 8.