BIOMARKERS

Molecular Biopsy of Human Tumors

- a resource for Precision Medicine *

194 related articles for article (PubMed ID: 11861911)

  • 1. Regularities of context-dependent codon bias in eukaryotic genes.
    Fedorov A; Saxonov S; Gilbert W
    Nucleic Acids Res; 2002 Mar; 30(5):1192-7. PubMed ID: 11861911
    [TBL] [Abstract][Full Text] [Related]  

  • 2. Comparative analysis of the base biases at the gene terminal portions in seven eukaryote genomes.
    Niimura Y; Terabe M; Gojobori T; Miura K
    Nucleic Acids Res; 2003 Sep; 31(17):5195-201. PubMed ID: 12930971
    [TBL] [Abstract][Full Text] [Related]  

  • 3. Codon usage bias is correlated with gene expression levels in the fission yeast Schizosaccharomyces pombe.
    Hiraoka Y; Kawamata K; Haraguchi T; Chikashige Y
    Genes Cells; 2009 Apr; 14(4):499-509. PubMed ID: 19335619
    [TBL] [Abstract][Full Text] [Related]  

  • 4. Codon usage and tRNA genes in eukaryotes: correlation of codon usage diversity with translation efficiency and with CG-dinucleotide usage as assessed by multivariate analysis.
    Kanaya S; Yamada Y; Kinouchi M; Kudo Y; Ikemura T
    J Mol Evol; 2001; 53(4-5):290-8. PubMed ID: 11675589
    [TBL] [Abstract][Full Text] [Related]  

  • 5. Can codon usage bias explain intron phase distributions and exon symmetry?
    Ruvinsky A; Eskesen ST; Eskesen FN; Hurst LD
    J Mol Evol; 2005 Jan; 60(1):99-104. PubMed ID: 15696372
    [TBL] [Abstract][Full Text] [Related]  

  • 6. Codon usage by transposable elements and their host genes in five species.
    Lerat E; Capy P; Biémont C
    J Mol Evol; 2002 May; 54(5):625-37. PubMed ID: 11965435
    [TBL] [Abstract][Full Text] [Related]  

  • 7. Synonymous codon usage, accuracy of translation, and gene length in Caenorhabditis elegans.
    Marais G; Duret L
    J Mol Evol; 2001 Mar; 52(3):275-80. PubMed ID: 11428464
    [TBL] [Abstract][Full Text] [Related]  

  • 8. Expression pattern and, surprisingly, gene length shape codon usage in Caenorhabditis, Drosophila, and Arabidopsis.
    Duret L; Mouchiroud D
    Proc Natl Acad Sci U S A; 1999 Apr; 96(8):4482-7. PubMed ID: 10200288
    [TBL] [Abstract][Full Text] [Related]  

  • 9. Hill-Robertson interference is a minor determinant of variations in codon bias across Drosophila melanogaster and Caenorhabditis elegans genomes.
    Marais G; Piganeau G
    Mol Biol Evol; 2002 Sep; 19(9):1399-406. PubMed ID: 12200468
    [TBL] [Abstract][Full Text] [Related]  

  • 10. The nonrandom location of synonymous codons suggests that reading frame-independent forces have patterned codon preferences.
    Antezana MA; Kreitman M
    J Mol Evol; 1999 Jul; 49(1):36-43. PubMed ID: 10368432
    [TBL] [Abstract][Full Text] [Related]  

  • 11. Comprehensive analysis of amino acid and nucleotide composition in eukaryotic genomes, comparing genes and pseudogenes.
    Echols N; Harrison P; Balasubramanian S; Luscombe NM; Bertone P; Zhang Z; Gerstein M
    Nucleic Acids Res; 2002 Jun; 30(11):2515-23. PubMed ID: 12034841
    [TBL] [Abstract][Full Text] [Related]  

  • 12. On biased distribution of introns in various eukaryotes.
    Sakurai A; Fujimori S; Kochiwa H; Kitamura-Abe S; Washio T; Saito R; Carninci P; Hayashizaki Y; Tomita M
    Gene; 2002 Oct; 300(1-2):89-95. PubMed ID: 12468090
    [TBL] [Abstract][Full Text] [Related]  

  • 13. Factors affecting mito-nuclear codon usage interactions in the OXPHOS system of Drosophila melanogaster.
    Sun Z; Ma L; Murphy RW; Zhang X; Huang D
    J Genet Genomics; 2008 Dec; 35(12):729-35. PubMed ID: 19103428
    [TBL] [Abstract][Full Text] [Related]  

  • 14. Selection on codon bias.
    Hershberg R; Petrov DA
    Annu Rev Genet; 2008; 42():287-99. PubMed ID: 18983258
    [TBL] [Abstract][Full Text] [Related]  

  • 15. Constraint on di-nucleotides by codon usage bias in bacterial genomes.
    Satapathy SS; Powdel BR; Dutta M; Buragohain AK; Ray SK
    Gene; 2014 Feb; 536(1):18-28. PubMed ID: 24333347
    [TBL] [Abstract][Full Text] [Related]  

  • 16. The effect of local nucleotides on synonymous codon usage in the honeybee (Apis mellifera L.) genome.
    Cutler RW; Chantawannakul P
    J Mol Evol; 2007 Jun; 64(6):637-45. PubMed ID: 17541680
    [TBL] [Abstract][Full Text] [Related]  

  • 17. An improved implementation of effective number of codons (nc).
    Sun X; Yang Q; Xia X
    Mol Biol Evol; 2013 Jan; 30(1):191-6. PubMed ID: 22915832
    [TBL] [Abstract][Full Text] [Related]  

  • 18. Codon adaptation index as a measure of dominating codon bias.
    Carbone A; Zinovyev A; Képès F
    Bioinformatics; 2003 Nov; 19(16):2005-15. PubMed ID: 14594704
    [TBL] [Abstract][Full Text] [Related]  

  • 19. An evaluation of measures of synonymous codon usage bias.
    Comeron JM; Aguadé M
    J Mol Evol; 1998 Sep; 47(3):268-74. PubMed ID: 9732453
    [TBL] [Abstract][Full Text] [Related]  

  • 20. Translation initiation AUG context varies with codon usage bias and gene length in Drosophila melanogaster.
    Miyasaka H
    J Mol Evol; 2002 Jul; 55(1):52-64. PubMed ID: 12165842
    [TBL] [Abstract][Full Text] [Related]  

    [Next]    [New Search]
    of 10.