BIOMARKERS

Molecular Biopsy of Human Tumors

- a resource for Precision Medicine *

270 related articles for article (PubMed ID: 11884131)

  • 1. Long-range correlations between DNA bending sites: relation to the structure and dynamics of nucleosomes.
    Audit B; Vaillant C; Arneodo A; d'Aubenton-Carafa Y; Thermes C
    J Mol Biol; 2002 Mar; 316(4):903-18. PubMed ID: 11884131
    [TBL] [Abstract][Full Text] [Related]  

  • 2. Wavelet Analysis of DNA Bending Profiles reveals Structural Constraints on the Evolution of Genomic Sequences.
    Audit B; Vaillant C; Arnéodo A; d'Aubenton-Carafa Y; Thermes C
    J Biol Phys; 2004 Mar; 30(1):33-81. PubMed ID: 23345861
    [TBL] [Abstract][Full Text] [Related]  

  • 3. Archaeal histone selection of nucleosome positioning sequences and the procaryotic origin of histone-dependent genome evolution.
    Bailey KA; Pereira SL; Widom J; Reeve JN
    J Mol Biol; 2000 Oct; 303(1):25-34. PubMed ID: 11021967
    [TBL] [Abstract][Full Text] [Related]  

  • 4. Long-range correlations in genomic DNA: a signature of the nucleosomal structure.
    Audit B; Thermes C; Vaillant C; d'Aubenton-Carafa Y; Muzy JF; Arneodo A
    Phys Rev Lett; 2001 Mar; 86(11):2471-4. PubMed ID: 11289957
    [TBL] [Abstract][Full Text] [Related]  

  • 5. Re-cracking the nucleosome positioning code.
    Segal MR
    Stat Appl Genet Mol Biol; 2008; 7(1):Article14. PubMed ID: 18454729
    [TBL] [Abstract][Full Text] [Related]  

  • 6. Experiments confirm the influence of genome long-range correlations on nucleosome positioning.
    Vaillant C; Audit B; Arneodo A
    Phys Rev Lett; 2007 Nov; 99(21):218103. PubMed ID: 18233262
    [TBL] [Abstract][Full Text] [Related]  

  • 7. A statistical thermodynamic approach for predicting the sequence-dependent nucleosome positioning along genomes.
    Scipioni A; Morosetti S; De Santis P
    Biopolymers; 2009 Dec; 91(12):1143-53. PubMed ID: 19598227
    [TBL] [Abstract][Full Text] [Related]  

  • 8. Short-range order in two eukaryotic genomes: relation to chromosome structure.
    Widom J
    J Mol Biol; 1996 Jun; 259(4):579-88. PubMed ID: 8683566
    [TBL] [Abstract][Full Text] [Related]  

  • 9. Nucleosome positioning determinants.
    Fernandez AG; Anderson JN
    J Mol Biol; 2007 Aug; 371(3):649-68. PubMed ID: 17586522
    [TBL] [Abstract][Full Text] [Related]  

  • 10. Formation and positioning of nucleosomes: effect of sequence-dependent long-range correlated structural disorder.
    Vaillant C; Audit B; Thermes C; Arnéodo A
    Eur Phys J E Soft Matter; 2006 Mar; 19(3):263-77. PubMed ID: 16477390
    [TBL] [Abstract][Full Text] [Related]  

  • 11. Sequence-dependent nucleosome positioning.
    Chung HR; Vingron M
    J Mol Biol; 2009 Mar; 386(5):1411-22. PubMed ID: 19070622
    [TBL] [Abstract][Full Text] [Related]  

  • 12. Translational positioning of nucleosomes on DNA: the role of sequence-dependent isotropic DNA bending stiffness.
    Sivolob AV; Khrapunov SN
    J Mol Biol; 1995 Apr; 247(5):918-31. PubMed ID: 7723041
    [TBL] [Abstract][Full Text] [Related]  

  • 13. Nucleosome positioning in relation to nucleosome spacing and DNA sequence-specific binding of a protein.
    Pusarla RH; Vinayachandran V; Bhargava P
    FEBS J; 2007 May; 274(9):2396-410. PubMed ID: 17419736
    [TBL] [Abstract][Full Text] [Related]  

  • 14. Prediction of nucleosome positioning in genomes: limits and perspectives of physical and bioinformatic approaches.
    De Santis P; Morosetti S; Scipioni A
    J Biomol Struct Dyn; 2010 Jun; 27(6):747-64. PubMed ID: 20232931
    [TBL] [Abstract][Full Text] [Related]  

  • 15. Predicting nucleosome positioning in genomes: physical and bioinformatic approaches.
    Scipioni A; De Santis P
    Biophys Chem; 2011 May; 155(2-3):53-64. PubMed ID: 21482020
    [TBL] [Abstract][Full Text] [Related]  

  • 16. Nucleosomal locations of dominant DNA sequence motifs for histone-DNA interactions and nucleosome positioning.
    Thåström A; Bingham LM; Widom J
    J Mol Biol; 2004 May; 338(4):695-709. PubMed ID: 15099738
    [TBL] [Abstract][Full Text] [Related]  

  • 17. Translational and rotational settings of H2A.Z nucleosomes across the Saccharomyces cerevisiae genome.
    Albert I; Mavrich TN; Tomsho LP; Qi J; Zanton SJ; Schuster SC; Pugh BF
    Nature; 2007 Mar; 446(7135):572-6. PubMed ID: 17392789
    [TBL] [Abstract][Full Text] [Related]  

  • 18. Genome-wide analysis predicts DNA structural motifs as nucleosome exclusion signals.
    Halder K; Halder R; Chowdhury S
    Mol Biosyst; 2009 Dec; 5(12):1703-12. PubMed ID: 19587895
    [TBL] [Abstract][Full Text] [Related]  

  • 19. Modulation of cyclobutane pyrimidine dimer formation in a positioned nucleosome containing poly(dA.dT) tracts.
    Schieferstein U; Thoma F
    Biochemistry; 1996 Jun; 35(24):7705-14. PubMed ID: 8672471
    [TBL] [Abstract][Full Text] [Related]  

  • 20. Dual role of DNA intrinsic curvature and flexibility in determining nucleosome stability.
    Anselmi C; Bocchinfuso G; De Santis P; Savino M; Scipioni A
    J Mol Biol; 1999 Mar; 286(5):1293-301. PubMed ID: 10064697
    [TBL] [Abstract][Full Text] [Related]  

    [Next]    [New Search]
    of 14.