118 related articles for article (PubMed ID: 12016057)
1. TranScout: prediction of gene expression regulatory proteins from their sequences.
Aguilar D; Oliva B; Aviles FX; Querol E
Bioinformatics; 2002 Apr; 18(4):597-607. PubMed ID: 12016057
[TBL] [Abstract][Full Text] [Related]
2. TOPDOM: database of domains and motifs with conservative location in transmembrane proteins.
Tusnády GE; Kalmár L; Hegyi H; Tompa P; Simon I
Bioinformatics; 2008 Jun; 24(12):1469-70. PubMed ID: 18434342
[TBL] [Abstract][Full Text] [Related]
3. Condition specific transcription factor binding site characterization in Saccharomyces cerevisiae.
Harrison R; DeLisi C
Bioinformatics; 2002 Oct; 18(10):1289-96. PubMed ID: 12376372
[TBL] [Abstract][Full Text] [Related]
4. ORFer--retrieval of protein sequences and open reading frames from GenBank and storage into relational databases or text files.
Büssow K; Hoffmann S; Sievert V
BMC Bioinformatics; 2002 Dec; 3():40. PubMed ID: 12493080
[TBL] [Abstract][Full Text] [Related]
5. ACGT-a comparative genomics tool.
Xie T; Hood L
Bioinformatics; 2003 May; 19(8):1039-40. PubMed ID: 12761070
[TBL] [Abstract][Full Text] [Related]
6. gpDB: a database of GPCRs, G-proteins, effectors and their interactions.
Theodoropoulou MC; Bagos PG; Spyropoulos IC; Hamodrakas SJ
Bioinformatics; 2008 Jun; 24(12):1471-2. PubMed ID: 18441001
[TBL] [Abstract][Full Text] [Related]
7. TrSDB: a proteome database of transcription factors.
Hermoso A; Aguilar D; Aviles FX; Querol E
Nucleic Acids Res; 2004 Jan; 32(Database issue):D171-3. PubMed ID: 14681387
[TBL] [Abstract][Full Text] [Related]
8. A Web-based classification system of DNA-binding protein families.
Karmirantzou M; Hamodrakas SJ
Protein Eng; 2001 Jul; 14(7):465-72. PubMed ID: 11522919
[TBL] [Abstract][Full Text] [Related]
9. RAG: RNA-As-Graphs database--concepts, analysis, and features.
Gan HH; Fera D; Zorn J; Shiffeldrim N; Tang M; Laserson U; Kim N; Schlick T
Bioinformatics; 2004 May; 20(8):1285-91. PubMed ID: 14962931
[TBL] [Abstract][Full Text] [Related]
10. Identifying property based sequence motifs in protein families and superfamilies: application to DNase-1 related endonucleases.
Mathura VS; Schein CH; Braun W
Bioinformatics; 2003 Jul; 19(11):1381-90. PubMed ID: 12874050
[TBL] [Abstract][Full Text] [Related]
11. Compensation for nucleotide bias in a genome by representation as a discrete channel with noise.
Schreiber M; Brown C
Bioinformatics; 2002 Apr; 18(4):507-12. PubMed ID: 12016048
[TBL] [Abstract][Full Text] [Related]
12. IPPRED: server for proteins interactions inference.
Goffard N; Garcia V; Iragne F; Groppi A; de Daruvar A
Bioinformatics; 2003 May; 19(7):903-4. PubMed ID: 12724307
[TBL] [Abstract][Full Text] [Related]
13. Database of repetitive elements in complete genomes and data mining using transcription factor binding sites.
Horng JT; Lin FM; Lin JH; Huang HD; Liu BJ
IEEE Trans Inf Technol Biomed; 2003 Jun; 7(2):93-100. PubMed ID: 12834164
[TBL] [Abstract][Full Text] [Related]
14. 3MOTIF: visualizing conserved protein sequence motifs in the protein structure database.
Bennett SP; Nevill-Manning CG; Brutlag DL
Bioinformatics; 2003 Mar; 19(4):541-2. PubMed ID: 12611811
[TBL] [Abstract][Full Text] [Related]
15. Blast sampling for structural and functional analyses.
Friedrich A; Ripp R; Garnier N; Bettler E; Deléage G; Poch O; Moulinier L
BMC Bioinformatics; 2007 Feb; 8():62. PubMed ID: 17319945
[TBL] [Abstract][Full Text] [Related]
16. BugView: a browser for comparing genomes.
Leader DP
Bioinformatics; 2004 Jan; 20(1):129-30. PubMed ID: 14693822
[TBL] [Abstract][Full Text] [Related]
17. Intersect: identification and visualization of overlaps in database search results.
Pegg SC; Novak WR; Babbitt PC
Bioinformatics; 2003 Oct; 19(15):1997-9. PubMed ID: 14555634
[TBL] [Abstract][Full Text] [Related]
18. Finding motifs in the twilight zone.
Keich U; Pevzner PA
Bioinformatics; 2002 Oct; 18(10):1374-81. PubMed ID: 12376382
[TBL] [Abstract][Full Text] [Related]
19. Combining phylogenetic data with co-regulated genes to identify regulatory motifs.
Wang T; Stormo GD
Bioinformatics; 2003 Dec; 19(18):2369-80. PubMed ID: 14668220
[TBL] [Abstract][Full Text] [Related]
20. 3D-footprint: a database for the structural analysis of protein-DNA complexes.
Contreras-Moreira B
Nucleic Acids Res; 2010 Jan; 38(Database issue):D91-7. PubMed ID: 19767616
[TBL] [Abstract][Full Text] [Related]
[Next] [New Search]