88 related articles for article (PubMed ID: 12023812)
1. DNA sequence recognition of thiazole-containing cross-linked polyamides can be favored.
Burckhardt G; Simon H; Birch-Hirschfeld E; Kittler L; Sharma SK; Lown JW; Zimmer C
J Biomol Struct Dyn; 2002 Jun; 19(6):1101-9. PubMed ID: 12023812
[TBL] [Abstract][Full Text] [Related]
2. DNA Sequence Recognition of a Cross-Linked Polyamide: CD Studies, Footprinting and Effects on the Activity of DNA Gyrase.
Burckhardt G; Förtsch I; Simon H; Birch-Hirschfeld E; Kittler L; Schütz H; Sharma SK; Lown JW; Zimmer C
J Biomol Struct Dyn; 2000; 17 Suppl 1():355-63. PubMed ID: 22607444
[TBL] [Abstract][Full Text] [Related]
3. Recognition of the four Watson-Crick base pairs in the DNA minor groove by synthetic ligands.
White S; Szewczyk JW; Turner JM; Baird EE; Dervan PB
Nature; 1998 Jan; 391(6666):468-71. PubMed ID: 9461213
[TBL] [Abstract][Full Text] [Related]
4. Effects of the A.T/T.A degeneracy of pyrrole--imidazole polyamide recognition in the minor groove of DNA.
White S; Baird EE; Dervan PB
Biochemistry; 1996 Sep; 35(38):12532-7. PubMed ID: 8823190
[TBL] [Abstract][Full Text] [Related]
5. Molecular recognition of DNA base pairs by the formamido/pyrrole and formamido/imidazole pairings in stacked polyamides.
Buchmueller KL; Staples AM; Uthe PB; Howard CM; Pacheco KA; Cox KK; Henry JA; Bailey SL; Horick SM; Nguyen B; Wilson WD; Lee M
Nucleic Acids Res; 2005; 33(3):912-21. PubMed ID: 15703305
[TBL] [Abstract][Full Text] [Related]
6. DNA recognition: design, synthesis and biophysical characteristics of pyrrole(H) based polyamides.
Chavda S; Mulder K; Brown T; Mackay H; Babu B; Westrate L; Ferguson A; Lin S; Kiakos K; Ramos JP; Munde M; Wilson WD; Hartley JA; Lee M
Med Chem; 2010 May; 6(3):150-8. PubMed ID: 20632976
[TBL] [Abstract][Full Text] [Related]
7. Combinatorial determination of sequence specificity for nanomolar DNA-binding hairpin polyamides.
Vashisht Gopal YN; Van Dyke MW
Biochemistry; 2003 Jun; 42(22):6891-903. PubMed ID: 12779344
[TBL] [Abstract][Full Text] [Related]
8. Minor groove DNA-protein contacts upstream of a tRNA gene detected with a synthetic DNA binding ligand.
McBryant SJ; Baird EE; Trauger JW; Dervan PB; Gottesfeld JM
J Mol Biol; 1999 Mar; 286(4):973-81. PubMed ID: 10047474
[TBL] [Abstract][Full Text] [Related]
9. Extending the language of DNA molecular recognition by polyamides: unexpected influence of imidazole and pyrrole arrangement on binding affinity and specificity.
Buchmueller KL; Staples AM; Howard CM; Horick SM; Uthe PB; Le NM; Cox KK; Nguyen B; Pacheco KA; Wilson WD; Lee M
J Am Chem Soc; 2005 Jan; 127(2):742-50. PubMed ID: 15643900
[TBL] [Abstract][Full Text] [Related]
10. On the pairing rules for recognition in the minor groove of DNA by pyrrole-imidazole polyamides.
White S; Baird EE; Dervan PB
Chem Biol; 1997 Aug; 4(8):569-78. PubMed ID: 9281524
[TBL] [Abstract][Full Text] [Related]
11. Imidazopyridine/Pyrrole and hydroxybenzimidazole/pyrrole pairs for DNA minor groove recognition.
Renneberg D; Dervan PB
J Am Chem Soc; 2003 May; 125(19):5707-16. PubMed ID: 12733909
[TBL] [Abstract][Full Text] [Related]
12. Anti-repression of RNA polymerase II transcription by pyrrole-imidazole polyamides.
Dickinson LA; Trauger JW; Baird EE; Ghazal P; Dervan PB; Gottesfeld JM
Biochemistry; 1999 Aug; 38(33):10801-7. PubMed ID: 10451376
[TBL] [Abstract][Full Text] [Related]
13. Sequence specific recognition of DNA by tailor-made hairpin conjugates of achiral seco-cyclopropaneindoline-2-benzofurancarboxamide and pyrrole-imidazole polyamides.
Price CA; Lingerfelt BM; Handl HL; Kiakos K; Hartley JA; Lee M
Bioorg Med Chem Lett; 2005 Jun; 15(12):3151-6. PubMed ID: 15876536
[TBL] [Abstract][Full Text] [Related]
14. Molecular recognition between oligopeptides and nucleic acids: DNA sequence specificity and binding properties of thiazole-lexitropsins incorporating the concepts of base site acceptance and avoidance.
Rao KE; Shea RG; Yadagiri B; Lown JW
Anticancer Drug Des; 1990 Feb; 5(1):3-20. PubMed ID: 2156516
[TBL] [Abstract][Full Text] [Related]
15. Effects of the N-terminal acylamido group of imidazole- and pyrrole-containing polyamides on DNA sequence specificity and binding affinity.
Westrate L; Mackay H; Brown T; Nguyen B; Kluza J; Wilson WD; Lee M; Hartley JA
Biochemistry; 2009 Jun; 48(24):5679-88. PubMed ID: 19419200
[TBL] [Abstract][Full Text] [Related]
16. DNA sequence recognition in the minor groove by crosslinked polyamides: The effect of N-terminal head group and linker length on binding affinity and specificity.
O'Hare CC; Mack D; Tandon M; Sharma SK; Lown JW; Kopka ML; Dickerson RE; Hartley JA
Proc Natl Acad Sci U S A; 2002 Jan; 99(1):72-7. PubMed ID: 11756678
[TBL] [Abstract][Full Text] [Related]
17. Expanding the repertoire of heterocycle ring pairs for programmable minor groove DNA recognition.
Marques MA; Doss RM; Foister S; Dervan PB
J Am Chem Soc; 2004 Aug; 126(33):10339-49. PubMed ID: 15315448
[TBL] [Abstract][Full Text] [Related]
18. Recognition of the DNA minor groove by pyrrole-imidazole polyamides: comparison of desmethyl- and N-methylpyrrole.
Bremer RE; Szewczyk JW; Baird EE; Dervan PB
Bioorg Med Chem; 2000 Aug; 8(8):1947-55. PubMed ID: 11003140
[TBL] [Abstract][Full Text] [Related]
19. Discrimination of hairpin polyamides with an alpha-substituted-gamma-aminobutyric acid as a 5'-TG-3' reader in DNA minor groove.
Zhang W; Bando T; Sugiyama H
J Am Chem Soc; 2006 Jul; 128(27):8766-76. PubMed ID: 16819870
[TBL] [Abstract][Full Text] [Related]
20. Design and synthesis of novel thiazole-containing cross-linked polyamides related to the antiviral antibiotic distamycin.
Sharma SK; Tandon M; Lown JW
J Org Chem; 2000 Feb; 65(4):1102-7. PubMed ID: 10814060
[TBL] [Abstract][Full Text] [Related]
[Next] [New Search]
