BIOMARKERS

Molecular Biopsy of Human Tumors

- a resource for Precision Medicine *

272 related articles for article (PubMed ID: 12066843)

  • 1. Operon conservation from the point of view of Escherichia coli, and inference of functional interdependence of gene products from genome context.
    Moreno-Hagelsieb G; Collado-Vides J
    In Silico Biol; 2002; 2(2):87-95. PubMed ID: 12066843
    [TBL] [Abstract][Full Text] [Related]  

  • 2. Detection of operons.
    Yan Y; Moult J
    Proteins; 2006 Aug; 64(3):615-28. PubMed ID: 16755590
    [TBL] [Abstract][Full Text] [Related]  

  • 3. Inferring functional relationships from conservation of gene order.
    Moreno-Hagelsieb G
    Methods Mol Biol; 2008; 453():181-99. PubMed ID: 18712303
    [TBL] [Abstract][Full Text] [Related]  

  • 4. Nebulon: a system for the inference of functional relationships of gene products from the rearrangement of predicted operons.
    Janga SC; Collado-Vides J; Moreno-Hagelsieb G
    Nucleic Acids Res; 2005; 33(8):2521-30. PubMed ID: 15867197
    [TBL] [Abstract][Full Text] [Related]  

  • 5. Analysis of the cellular functions of Escherichia coli operons and their conservation in Bacillus subtilis.
    de Daruvar A; Collado-Vides J; Valencia A
    J Mol Evol; 2002 Aug; 55(2):211-21. PubMed ID: 12107597
    [TBL] [Abstract][Full Text] [Related]  

  • 6. Conservation of adjacency as evidence of paralogous operons.
    Janga SC; Moreno-Hagelsieb G
    Nucleic Acids Res; 2004; 32(18):5392-7. PubMed ID: 15477389
    [TBL] [Abstract][Full Text] [Related]  

  • 7. Conservation of gene co-regulation between two prokaryotes: Bacillus subtilis and Escherichia coli.
    Okuda S; Kawashima S; Goto S; Kanehisa M
    Genome Inform; 2005; 16(1):116-24. PubMed ID: 16362913
    [TBL] [Abstract][Full Text] [Related]  

  • 8. The distinctive signatures of promoter regions and operon junctions across prokaryotes.
    Janga SC; Lamboy WF; Huerta AM; Moreno-Hagelsieb G
    Nucleic Acids Res; 2006; 34(14):3980-7. PubMed ID: 16914446
    [TBL] [Abstract][Full Text] [Related]  

  • 9. Genome-wide experimental determination of barriers to horizontal gene transfer.
    Sorek R; Zhu Y; Creevey CJ; Francino MP; Bork P; Rubin EM
    Science; 2007 Nov; 318(5855):1449-52. PubMed ID: 17947550
    [TBL] [Abstract][Full Text] [Related]  

  • 10. Operons and the effect of genome redundancy in deciphering functional relationships using phylogenetic profiles.
    Moreno-Hagelsieb G; Janga SC
    Proteins; 2008 Feb; 70(2):344-52. PubMed ID: 17671982
    [TBL] [Abstract][Full Text] [Related]  

  • 11. Computational prediction of operons in Synechococcus sp. WH8102.
    Chen X; Su Z; Xu Y; Jiang T
    Genome Inform; 2004; 15(2):211-22. PubMed ID: 15706507
    [TBL] [Abstract][Full Text] [Related]  

  • 12. Operon prediction based on SVM.
    Zhang GQ; Cao ZW; Luo QM; Cai YD; Li YX
    Comput Biol Chem; 2006 Jun; 30(3):233-40. PubMed ID: 16716751
    [TBL] [Abstract][Full Text] [Related]  

  • 13. Genome alignment, evolution of prokaryotic genome organization, and prediction of gene function using genomic context.
    Wolf YI; Rogozin IB; Kondrashov AS; Koonin EV
    Genome Res; 2001 Mar; 11(3):356-72. PubMed ID: 11230160
    [TBL] [Abstract][Full Text] [Related]  

  • 14. Gene cluster analysis method identifies horizontally transferred genes with high reliability and indicates that they provide the main mechanism of operon gain in 8 species of gamma-Proteobacteria.
    Homma K; Fukuchi S; Nakamura Y; Gojobori T; Nishikawa K
    Mol Biol Evol; 2007 Mar; 24(3):805-13. PubMed ID: 17185745
    [TBL] [Abstract][Full Text] [Related]  

  • 15. Evolution of mosaic operons by horizontal gene transfer and gene displacement in situ.
    Omelchenko MV; Makarova KS; Wolf YI; Rogozin IB; Koonin EV
    Genome Biol; 2003; 4(9):R55. PubMed ID: 12952534
    [TBL] [Abstract][Full Text] [Related]  

  • 16. Genomes in flux: the evolution of archaeal and proteobacterial gene content.
    Snel B; Bork P; Huynen MA
    Genome Res; 2002 Jan; 12(1):17-25. PubMed ID: 11779827
    [TBL] [Abstract][Full Text] [Related]  

  • 17. Computational identification of operons in microbial genomes.
    Zheng Y; Szustakowski JD; Fortnow L; Roberts RJ; Kasif S
    Genome Res; 2002 Aug; 12(8):1221-30. PubMed ID: 12176930
    [TBL] [Abstract][Full Text] [Related]  

  • 18. A DNA structural atlas for Escherichia coli.
    Pedersen AG; Jensen LJ; Brunak S; Staerfeldt HH; Ussery DW
    J Mol Biol; 2000 Jun; 299(4):907-30. PubMed ID: 10843847
    [TBL] [Abstract][Full Text] [Related]  

  • 19. Genome-wide similarity search for transcription factors and their binding sites in a metal-reducing prokaryote Geobacter sulfurreducens.
    Yan B; Lovley DR; Krushkal J
    Biosystems; 2007; 90(2):421-41. PubMed ID: 17184904
    [TBL] [Abstract][Full Text] [Related]  

  • 20. A phylogenetic analysis of the pSymB replicon from the Sinorhizobium meliloti genome reveals a complex evolutionary history.
    Wong K; Golding GB
    Can J Microbiol; 2003 Apr; 49(4):269-80. PubMed ID: 12897836
    [TBL] [Abstract][Full Text] [Related]  

    [Next]    [New Search]
    of 14.