1168 related articles for article (PubMed ID: 12079356)
1. Ions and counterions in a biological channel: a molecular dynamics simulation of OmpF porin from Escherichia coli in an explicit membrane with 1 M KCl aqueous salt solution.
Im W; Roux B
J Mol Biol; 2002 Jun; 319(5):1177-97. PubMed ID: 12079356
[TBL] [Abstract][Full Text] [Related]
2. Molecular dynamics of the KcsA K(+) channel in a bilayer membrane.
Bernèche S; Roux B
Biophys J; 2000 Jun; 78(6):2900-17. PubMed ID: 10827971
[TBL] [Abstract][Full Text] [Related]
3. Electrostatic properties of two porin channels from Escherichia coli.
Karshikoff A; Spassov V; Cowan SW; Ladenstein R; Schirmer T
J Mol Biol; 1994 Jul; 240(4):372-84. PubMed ID: 8035460
[TBL] [Abstract][Full Text] [Related]
4. Translocation and interactions of L-arabinose in OmpF porin: A molecular dynamics study.
Malek K; Maghari A
Biochem Biophys Res Commun; 2007 Jan; 352(1):104-10. PubMed ID: 17112466
[TBL] [Abstract][Full Text] [Related]
5. Brownian dynamics simulation of ion flow through porin channels.
Schirmer T; Phale PS
J Mol Biol; 1999 Dec; 294(5):1159-67. PubMed ID: 10600374
[TBL] [Abstract][Full Text] [Related]
6. Ion permeation and selectivity of OmpF porin: a theoretical study based on molecular dynamics, Brownian dynamics, and continuum electrodiffusion theory.
Im W; Roux B
J Mol Biol; 2002 Sep; 322(4):851-69. PubMed ID: 12270719
[TBL] [Abstract][Full Text] [Related]
7. Crystal structure of osmoporin OmpC from E. coli at 2.0 A.
Baslé A; Rummel G; Storici P; Rosenbusch JP; Schirmer T
J Mol Biol; 2006 Oct; 362(5):933-42. PubMed ID: 16949612
[TBL] [Abstract][Full Text] [Related]
8. Dielectric saturation of water in a membrane protein channel.
Aguilella-Arzo M; Andrio A; Aguilella VM; Alcaraz A
Phys Chem Chem Phys; 2009 Jan; 11(2):358-65. PubMed ID: 19088992
[TBL] [Abstract][Full Text] [Related]
9. Electrostatic properties and macroscopic electrodiffusion in OmpF porin and mutants.
Aguilella-Arzo M; García-Celma JJ; Cervera J; Alcaraz A; Aguilella VM
Bioelectrochemistry; 2007 May; 70(2):320-7. PubMed ID: 16769257
[TBL] [Abstract][Full Text] [Related]
10. Cause and effect of melittin-induced pore formation: a computational approach.
Manna M; Mukhopadhyay C
Langmuir; 2009 Oct; 25(20):12235-42. PubMed ID: 19754202
[TBL] [Abstract][Full Text] [Related]
11. A molecular dynamics study of the pores formed by Escherichia coli OmpF porin in a fully hydrated palmitoyloleoylphosphatidylcholine bilayer.
Tieleman DP; Berendsen HJ
Biophys J; 1998 Jun; 74(6):2786-801. PubMed ID: 9635733
[TBL] [Abstract][Full Text] [Related]
12. Role of water molecules in the KcsA protein channel by molecular dynamics calculations.
Compoint M; Boiteux C; Huetz P; Ramseyer C; Girardet C
Phys Chem Chem Phys; 2005 Dec; 7(24):4138-45. PubMed ID: 16474879
[TBL] [Abstract][Full Text] [Related]
13. Cation-selective pathway of OmpF porin revealed by anomalous X-ray diffraction.
Dhakshnamoorthy B; Raychaudhury S; Blachowicz L; Roux B
J Mol Biol; 2010 Feb; 396(2):293-300. PubMed ID: 19932117
[TBL] [Abstract][Full Text] [Related]
14. Voltage-gating of Escherichia coli porin: a cystine-scanning mutagenesis study of loop 3.
Bainbridge G; Mobasheri H; Armstrong GA; Lea EJ; Lakey JH
J Mol Biol; 1998 Jan; 275(2):171-6. PubMed ID: 9466900
[TBL] [Abstract][Full Text] [Related]
15. The role of conformation in ion permeation in a K+ channel.
Domene C; Vemparala S; Furini S; Sharp K; Klein ML
J Am Chem Soc; 2008 Mar; 130(11):3389-98. PubMed ID: 18293969
[TBL] [Abstract][Full Text] [Related]
16. Why do the outer membrane proteins OmpF from E. coli and OprP from P. aeruginosa prefer trimers? Simulation studies.
Niramitranon J; Sansom MS; Pongprayoon P
J Mol Graph Model; 2016 Apr; 65():1-7. PubMed ID: 26895142
[TBL] [Abstract][Full Text] [Related]
17. Pore formation coupled to ion transport through lipid membranes as induced by transmembrane ionic charge imbalance: atomistic molecular dynamics study.
Gurtovenko AA; Vattulainen I
J Am Chem Soc; 2005 Dec; 127(50):17570-1. PubMed ID: 16351063
[TBL] [Abstract][Full Text] [Related]
18. Effect of NaCl and KCl on phosphatidylcholine and phosphatidylethanolamine lipid membranes: insight from atomic-scale simulations for understanding salt-induced effects in the plasma membrane.
Gurtovenko AA; Vattulainen I
J Phys Chem B; 2008 Feb; 112(7):1953-62. PubMed ID: 18225878
[TBL] [Abstract][Full Text] [Related]
19. Potassium and sodium binding to the outer mouth of the K+ channel.
Guidoni L; Torre V; Carloni P
Biochemistry; 1999 Jul; 38(27):8599-604. PubMed ID: 10393534
[TBL] [Abstract][Full Text] [Related]
20. Voltage and pH-induced channel closure of porin OmpF visualized by atomic force microscopy.
Müller DJ; Engel A
J Mol Biol; 1999 Jan; 285(4):1347-51. PubMed ID: 9917378
[TBL] [Abstract][Full Text] [Related]
[Next] [New Search]