These tools will no longer be maintained as of December 31, 2024. Archived website can be found here. PubMed4Hh GitHub repository can be found here. Contact NLM Customer Service if you have questions.
320 related articles for article (PubMed ID: 12080098)
1. Sequence-dependent motions of DNA: a normal mode analysis at the base-pair level. Matsumoto A; Olson WK Biophys J; 2002 Jul; 83(1):22-41. PubMed ID: 12080098 [TBL] [Abstract][Full Text] [Related]
2. Spatial translational motions of base pairs in DNA molecules: application of the extended matrix generator method. Marky NL; Olson WK Biopolymers; 1994 Jan; 34(1):121-42. PubMed ID: 8110965 [TBL] [Abstract][Full Text] [Related]
3. Normal-Mode Analysis of Circular DNA at the Base-Pair Level. 2. Large-Scale Configurational Transformation of a Naturally Curved Molecule. Matsumoto A; Tobias I; Olson WK J Chem Theory Comput; 2005 Jan; 1(1):130-42. PubMed ID: 26641124 [TBL] [Abstract][Full Text] [Related]
4. From rigid base pairs to semiflexible polymers: coarse-graining DNA. Becker NB; Everaers R Phys Rev E Stat Nonlin Soft Matter Phys; 2007 Aug; 76(2 Pt 1):021923. PubMed ID: 17930081 [TBL] [Abstract][Full Text] [Related]
5. Normal-Mode Analysis of Circular DNA at the Base-Pair Level. 1. Comparison of Computed Motions with the Predicted Behavior of an Ideal Elastic Rod. Matsumoto A; Tobias I; Olson WK J Chem Theory Comput; 2005 Jan; 1(1):117-29. PubMed ID: 26641123 [TBL] [Abstract][Full Text] [Related]
6. Conformational deformability of RNA: a harmonic mode analysis. Zacharias M; Sklenar H Biophys J; 2000 May; 78(5):2528-42. PubMed ID: 10777750 [TBL] [Abstract][Full Text] [Related]
7. PREDICTED EFFECTS OF LOCAL CONFORMATIONAL COUPLING AND EXTERNAL RESTRAINTS ON THE TORSIONAL PROPERTIES OF SINGLE DNA MOLECULES. Matsumoto A; Olson WK Multiscale Model Simul; 2006; 5(4):1227-1247. PubMed ID: 19081755 [TBL] [Abstract][Full Text] [Related]
12. Structural features of B-DNA dodecamer crystal structures: influence of crystal packing versus base sequence. Ghosh A; Bansal M Indian J Biochem Biophys; 2001; 38(1-2):7-15. PubMed ID: 11563334 [TBL] [Abstract][Full Text] [Related]
13. Influence of fluctuations on DNA curvature. A comparison of flexible and static wedge models of intrinsically bent DNA. Olson WK; Marky NL; Jernigan RL; Zhurkin VB J Mol Biol; 1993 Jul; 232(2):530-54. PubMed ID: 8345522 [TBL] [Abstract][Full Text] [Related]
17. DNA sequence-dependent deformability--insights from computer simulations. Lankas F Biopolymers; 2004 Feb; 73(3):327-39. PubMed ID: 14755569 [TBL] [Abstract][Full Text] [Related]
18. Molecular dynamics simulations of B '-DNA: sequence effects on A-tract-induced bending and flexibility. McConnell KJ; Beveridge DL J Mol Biol; 2001 Nov; 314(1):23-40. PubMed ID: 11724529 [TBL] [Abstract][Full Text] [Related]
19. Implications of the dependence of the elastic properties of DNA on nucleotide sequence. Olson WK; Swigon D; Coleman BD Philos Trans A Math Phys Eng Sci; 2004 Jul; 362(1820):1403-22. PubMed ID: 15306458 [TBL] [Abstract][Full Text] [Related]
20. Comparison of molecular dynamics and harmonic mode calculations on RNA. Zacharias M Biopolymers; 2000 Dec; 54(7):547-60. PubMed ID: 10984406 [TBL] [Abstract][Full Text] [Related] [Next] [New Search]