These tools will no longer be maintained as of December 31, 2024. Archived website can be found here. PubMed4Hh GitHub repository can be found here. Contact NLM Customer Service if you have questions.


BIOMARKERS

Molecular Biopsy of Human Tumors

- a resource for Precision Medicine *

110 related articles for article (PubMed ID: 12144175)

  • 1. Strategies for the identification, the assembly and the classification of integrated biological systems in completely sequenced genomes.
    Quentin Y; Chabalier J; Fichant G
    Comput Chem; 2002 Jul; 26(5):447-57. PubMed ID: 12144175
    [TBL] [Abstract][Full Text] [Related]  

  • 2. The FunCat, a functional annotation scheme for systematic classification of proteins from whole genomes.
    Ruepp A; Zollner A; Maier D; Albermann K; Hani J; Mokrejs M; Tetko I; Güldener U; Mannhaupt G; Münsterkötter M; Mewes HW
    Nucleic Acids Res; 2004; 32(18):5539-45. PubMed ID: 15486203
    [TBL] [Abstract][Full Text] [Related]  

  • 3. ABCdb: an online resource for ABC transporter repertories from sequenced archaeal and bacterial genomes.
    Fichant G; Basse MJ; Quentin Y
    FEMS Microbiol Lett; 2006 Mar; 256(2):333-9. PubMed ID: 16499625
    [TBL] [Abstract][Full Text] [Related]  

  • 4. GFinisher: a new strategy to refine and finish bacterial genome assemblies.
    Guizelini D; Raittz RT; Cruz LM; Souza EM; Steffens MB; Pedrosa FO
    Sci Rep; 2016 Oct; 6():34963. PubMed ID: 27721396
    [TBL] [Abstract][Full Text] [Related]  

  • 5. Re-annotation of genome microbial coding-sequences: finding new genes and inaccurately annotated genes.
    Bocs S; Danchin A; Médigue C
    BMC Bioinformatics; 2002; 3():5. PubMed ID: 11879526
    [TBL] [Abstract][Full Text] [Related]  

  • 6. Using KBase to Assemble and Annotate Prokaryotic Genomes.
    Allen B; Drake M; Harris N; Sullivan T
    Curr Protoc Microbiol; 2017 Aug; 46():1E.13.1-1E.13.18. PubMed ID: 28800158
    [TBL] [Abstract][Full Text] [Related]  

  • 7. The proteome: structure, function and evolution.
    Fleming K; Kelley LA; Islam SA; MacCallum RM; Muller A; Pazos F; Sternberg MJ
    Philos Trans R Soc Lond B Biol Sci; 2006 Mar; 361(1467):441-51. PubMed ID: 16524832
    [TBL] [Abstract][Full Text] [Related]  

  • 8. BLAST-XYPlot Viewer: A Tool for Performing BLAST in Whole-Genome Sequenced Bacteria/Archaea and Visualize Whole Results Simultaneously.
    Pedraza-Pérez Y; Cuevas-Vede RA; Canto-Gómez ÁB; López-Pliego L; Gutiérrez-Ríos RM; Hernández-Lucas I; Rubín-Linares G; Martínez-Laguna Y; López-Olguín JF; Fuentes-Ramírez LE
    G3 (Bethesda); 2018 Jul; 8(7):2167-2172. PubMed ID: 29789313
    [TBL] [Abstract][Full Text] [Related]  

  • 9. ISQuest: finding insertion sequences in prokaryotic sequence fragment data.
    Biswas A; Gauthier DT; Ranjan D; Zubair M
    Bioinformatics; 2015 Nov; 31(21):3406-12. PubMed ID: 26116929
    [TBL] [Abstract][Full Text] [Related]  

  • 10. The subsystems approach to genome annotation and its use in the project to annotate 1000 genomes.
    Overbeek R; Begley T; Butler RM; Choudhuri JV; Chuang HY; Cohoon M; de Crécy-Lagard V; Diaz N; Disz T; Edwards R; Fonstein M; Frank ED; Gerdes S; Glass EM; Goesmann A; Hanson A; Iwata-Reuyl D; Jensen R; Jamshidi N; Krause L; Kubal M; Larsen N; Linke B; McHardy AC; Meyer F; Neuweger H; Olsen G; Olson R; Osterman A; Portnoy V; Pusch GD; Rodionov DA; Rückert C; Steiner J; Stevens R; Thiele I; Vassieva O; Ye Y; Zagnitko O; Vonstein V
    Nucleic Acids Res; 2005; 33(17):5691-702. PubMed ID: 16214803
    [TBL] [Abstract][Full Text] [Related]  

  • 11. Fast model-based protein homology detection without alignment.
    Hochreiter S; Heusel M; Obermayer K
    Bioinformatics; 2007 Jul; 23(14):1728-36. PubMed ID: 17488755
    [TBL] [Abstract][Full Text] [Related]  

  • 12. A new set of bioinformatics tools for genome projects.
    Almeida LG; Paixão R; Souza RC; Costa GC; Almeida DF; Vasconcelos AT
    Genet Mol Res; 2004 Mar; 3(1):26-52. PubMed ID: 15100986
    [TBL] [Abstract][Full Text] [Related]  

  • 13. Structural characterization of genomes by large scale sequence-structure threading.
    Cherkasov A; Jones SJ
    BMC Bioinformatics; 2004 Apr; 5():37. PubMed ID: 15061866
    [TBL] [Abstract][Full Text] [Related]  

  • 14. PPD - Proteome Profile Database.
    Sakharkar KR; Chow VT
    In Silico Biol; 2004; 4(2):219-23. PubMed ID: 15107025
    [TBL] [Abstract][Full Text] [Related]  

  • 15. PCAS--a precomputed proteome annotation database resource.
    Zhang Y; Yin Y; Chen Y; Gao G; Yu P; Luo J; Jiang Y
    BMC Genomics; 2003 Nov; 4(1):42. PubMed ID: 14594458
    [TBL] [Abstract][Full Text] [Related]  

  • 16. Towards a reliable objective function for multiple sequence alignments.
    Thompson JD; Plewniak F; Ripp R; Thierry JC; Poch O
    J Mol Biol; 2001 Dec; 314(4):937-51. PubMed ID: 11734009
    [TBL] [Abstract][Full Text] [Related]  

  • 17. Integrated Transcriptomic-Proteomic Analysis Using a Proteogenomic Workflow Refines Rat Genome Annotation.
    Kumar D; Yadav AK; Jia X; Mulvenna J; Dash D
    Mol Cell Proteomics; 2016 Jan; 15(1):329-39. PubMed ID: 26560066
    [TBL] [Abstract][Full Text] [Related]  

  • 18. Comprehensive de novo structure prediction in a systems-biology context for the archaea Halobacterium sp. NRC-1.
    Bonneau R; Baliga NS; Deutsch EW; Shannon P; Hood L
    Genome Biol; 2004; 5(8):R52. PubMed ID: 15287974
    [TBL] [Abstract][Full Text] [Related]  

  • 19. Genomics. Annotation of the Drosophila genome.
    Karlin S; Bergman A; Gentles AJ
    Nature; 2001 May; 411(6835):259-60. PubMed ID: 11357119
    [No Abstract]   [Full Text] [Related]  

  • 20. Comparative Genomics for Prokaryotes.
    Setubal JC; Almeida NF; Wattam AR
    Methods Mol Biol; 2018; 1704():55-78. PubMed ID: 29277863
    [TBL] [Abstract][Full Text] [Related]  

    [Next]    [New Search]
    of 6.