These tools will no longer be maintained as of December 31, 2024. Archived website can be found here. PubMed4Hh GitHub repository can be found here. Contact NLM Customer Service if you have questions.
229 related articles for article (PubMed ID: 12188759)
1. Classification of amino acids based on statistical results of known structures and cooperativity of protein folding. Chen H; Zhou X; Ou-Yang ZC Phys Rev E Stat Nonlin Soft Matter Phys; 2002 Jun; 65(6 Pt 1):061907. PubMed ID: 12188759 [TBL] [Abstract][Full Text] [Related]
2. Correlation between sequence hydrophobicity and surface-exposure pattern of database proteins. Moelbert S; Emberly E; Tang C Protein Sci; 2004 Mar; 13(3):752-62. PubMed ID: 14767075 [TBL] [Abstract][Full Text] [Related]
3. Contact pair dynamics during folding of two small proteins: chicken villin head piece and the Alzheimer protein beta-amyloid. Mukherjee A; Bagchi B J Chem Phys; 2004 Jan; 120(3):1602-12. PubMed ID: 15268287 [TBL] [Abstract][Full Text] [Related]
4. Interactions between hydrophobic side chains within alpha-helices. Creamer TP; Rose GD Protein Sci; 1995 Jul; 4(7):1305-14. PubMed ID: 7670373 [TBL] [Abstract][Full Text] [Related]
5. Electronic properties of the amino acid side chains contribute to the structural preferences in protein folding. Dwyer DS J Biomol Struct Dyn; 2001 Jun; 18(6):881-92. PubMed ID: 11444376 [TBL] [Abstract][Full Text] [Related]
6. Solvent-amino acid interaction energies in three-dimensional-lattice Monte Carlo simulations of a model 27-mer protein: Folding thermodynamics and kinetics. Leonhard K; Prausnitz JM; Radke CJ Protein Sci; 2004 Feb; 13(2):358-69. PubMed ID: 14739322 [TBL] [Abstract][Full Text] [Related]
7. Characteristic features of amino acid residues in coiled-coil protein structures. Gromiha MM; Parry DA Biophys Chem; 2004 Oct; 111(2):95-103. PubMed ID: 15381307 [TBL] [Abstract][Full Text] [Related]
9. Protein structures-based neighborhood analysis vs preferential interactions between the special pairs of amino acids? Wang J; Cao Z; Yu J J Biomol Struct Dyn; 2011 Feb; 28(4):629-32; discussion 669-674. PubMed ID: 21142240 [No Abstract] [Full Text] [Related]
10. Amino acid size, charge, hydropathy indices and matrices for protein structure analysis. Biro JC Theor Biol Med Model; 2006 Mar; 3():15. PubMed ID: 16551371 [TBL] [Abstract][Full Text] [Related]
11. Free energies of amino acid side-chain rotamers in alpha-helices, beta-sheets and alpha-helix N-caps. Stapley BJ; Doig AJ J Mol Biol; 1997 Sep; 272(3):456-64. PubMed ID: 9325103 [TBL] [Abstract][Full Text] [Related]
12. Folding type specific secondary structure propensities of synonymous codons. Gu W; Zhou T; Ma J; Sun X; Lu Z IEEE Trans Nanobioscience; 2003 Sep; 2(3):150-7. PubMed ID: 15376949 [TBL] [Abstract][Full Text] [Related]
13. Use of variable selection in modeling the secondary structural content of proteins from their composition of amino acid residues. Pilizota T; Lucić B; Trinajstić N J Chem Inf Comput Sci; 2004; 44(1):113-21. PubMed ID: 14741017 [TBL] [Abstract][Full Text] [Related]
14. Relative stability of major types of beta-turns as a function of amino acid composition: a study based on Ab initio energetic and natural abundance data. Perczel A; Jákli I; McAllister MA; Csizmadia IG Chemistry; 2003 Jun; 9(11):2551-66. PubMed ID: 12794897 [TBL] [Abstract][Full Text] [Related]
15. Analysis on folding of misgurin using two-dimensional HP model. Yan S; Wu G Proteins; 2012 Mar; 80(3):764-73. PubMed ID: 22113728 [TBL] [Abstract][Full Text] [Related]
16. Design of amino acid sequences to fold into C(alpha)-model proteins. Amatori A; Tiana G; Sutto L; Ferkinghoff-Borg J; Trovato A; Broglia RA J Chem Phys; 2005 Aug; 123(5):054904. PubMed ID: 16108690 [TBL] [Abstract][Full Text] [Related]
17. Amino acid propensities for secondary structures are influenced by the protein structural class. Costantini S; Colonna G; Facchiano AM Biochem Biophys Res Commun; 2006 Apr; 342(2):441-51. PubMed ID: 16487481 [TBL] [Abstract][Full Text] [Related]
19. Position-dependent effects of fluorinated amino acids on the hydrophobic core formation of a heterodimeric coiled coil. Salwiczek M; Samsonov S; Vagt T; Nyakatura E; Fleige E; Numata J; Cölfen H; Pisabarro MT; Koksch B Chemistry; 2009 Aug; 15(31):7628-36. PubMed ID: 19579235 [TBL] [Abstract][Full Text] [Related]
20. How the folding rates of two- and multistate proteins depend on the amino acid properties. Huang JT; Huang W; Huang SR; Li X Proteins; 2014 Oct; 82(10):2375-82. PubMed ID: 24810705 [TBL] [Abstract][Full Text] [Related] [Next] [New Search]