108 related articles for article (PubMed ID: 12217692)
1. Toward understanding the mutagenicity of an environmental carcinogen: structural insights into nucleotide incorporation preferences.
Perlow RA; Broyde S
J Mol Biol; 2002 Sep; 322(2):291-309. PubMed ID: 12217692
[TBL] [Abstract][Full Text] [Related]
2. Mechanistic Basis for the Bypass of a Bulky DNA Adduct Catalyzed by a Y-Family DNA Polymerase.
Vyas R; Efthimiopoulos G; Tokarsky EJ; Malik CK; Basu AK; Suo Z
J Am Chem Soc; 2015 Sep; 137(37):12131-42. PubMed ID: 26327169
[TBL] [Abstract][Full Text] [Related]
3. Error-free and error-prone lesion bypass by human DNA polymerase kappa in vitro.
Zhang Y; Yuan F; Wu X; Wang M; Rechkoblit O; Taylor JS; Geacintov NE; Wang Z
Nucleic Acids Res; 2000 Nov; 28(21):4138-46. PubMed ID: 11058110
[TBL] [Abstract][Full Text] [Related]
4. The N-clasp of human DNA polymerase kappa promotes blockage or error-free bypass of adenine- or guanine-benzo[a]pyrenyl lesions.
Jia L; Geacintov NE; Broyde S
Nucleic Acids Res; 2008 Nov; 36(20):6571-84. PubMed ID: 18931375
[TBL] [Abstract][Full Text] [Related]
5. Mechanism of Error-Free Bypass of the Environmental Carcinogen N-(2'-Deoxyguanosin-8-yl)-3-aminobenzanthrone Adduct by Human DNA Polymerase η.
Patra A; Politica DA; Chatterjee A; Tokarsky EJ; Suo Z; Basu AK; Stone MP; Egli M
Chembiochem; 2016 Nov; 17(21):2033-2037. PubMed ID: 27556902
[TBL] [Abstract][Full Text] [Related]
6. Nucleotide incorporation by human DNA polymerase gamma opposite benzo[a]pyrene and benzo[c]phenanthrene diol epoxide adducts of deoxyguanosine and deoxyadenosine.
Graziewicz MA; Sayer JM; Jerina DM; Copeland WC
Nucleic Acids Res; 2004; 32(1):397-405. PubMed ID: 14729924
[TBL] [Abstract][Full Text] [Related]
7. DNA Polymerases η and ζ Combine to Bypass O(2)-[4-(3-Pyridyl)-4-oxobutyl]thymine, a DNA Adduct Formed from Tobacco Carcinogens.
Gowda AS; Spratt TE
Chem Res Toxicol; 2016 Mar; 29(3):303-16. PubMed ID: 26868090
[TBL] [Abstract][Full Text] [Related]
8. Structural and Kinetic Analysis of Miscoding Opposite the DNA Adduct 1,N6-Ethenodeoxyadenosine by Human Translesion DNA Polymerase η.
Patra A; Su Y; Zhang Q; Johnson KM; Guengerich FP; Egli M
J Biol Chem; 2016 Jul; 291(27):14134-14145. PubMed ID: 27226627
[TBL] [Abstract][Full Text] [Related]
9. Crystal structures of 2-acetylaminofluorene and 2-aminofluorene in complex with T7 DNA polymerase reveal mechanisms of mutagenesis.
Dutta S; Li Y; Johnson D; Dzantiev L; Richardson CC; Romano LJ; Ellenberger T
Proc Natl Acad Sci U S A; 2004 Nov; 101(46):16186-91. PubMed ID: 15528277
[TBL] [Abstract][Full Text] [Related]
10. Effect of oxidatively damaged DNA on the active site preorganization during nucleotide incorporation in a high fidelity polymerase from Bacillus stearothermophilus.
Venkatramani R; Radhakrishnan R
Proteins; 2008 May; 71(3):1360-72. PubMed ID: 18058909
[TBL] [Abstract][Full Text] [Related]
11. Efficient and error-free replication past a minor-groove DNA adduct by the sequential action of human DNA polymerases iota and kappa.
Washington MT; Minko IG; Johnson RE; Wolfle WT; Harris TM; Lloyd RS; Prakash S; Prakash L
Mol Cell Biol; 2004 Jul; 24(13):5687-93. PubMed ID: 15199127
[TBL] [Abstract][Full Text] [Related]
12. The use of an artificial nucleotide for polymerase-based recognition of carcinogenic O6-alkylguanine DNA adducts.
Wyss LA; Nilforoushan A; Williams DM; Marx A; Sturla SJ
Nucleic Acids Res; 2016 Aug; 44(14):6564-73. PubMed ID: 27378785
[TBL] [Abstract][Full Text] [Related]
13. Human RNA polymerase II is partially blocked by DNA adducts derived from tumorigenic benzo[c]phenanthrene diol epoxides: relating biological consequences to conformational preferences.
Schinecker TM; Perlow RA; Broyde S; Geacintov NE; Scicchitano DA
Nucleic Acids Res; 2003 Oct; 31(20):6004-15. PubMed ID: 14530448
[TBL] [Abstract][Full Text] [Related]
14. Relating repair susceptibility of carcinogen-damaged DNA with structural distortion and thermodynamic stability.
Wu M; Yan S; Patel DJ; Geacintov NE; Broyde S
Nucleic Acids Res; 2002 Aug; 30(15):3422-32. PubMed ID: 12140327
[TBL] [Abstract][Full Text] [Related]
15. Preferred WMSA catalytic mechanism of the nucleotidyl transfer reaction in human DNA polymerase κ elucidates error-free bypass of a bulky DNA lesion.
Lior-Hoffmann L; Wang L; Wang S; Geacintov NE; Broyde S; Zhang Y
Nucleic Acids Res; 2012 Oct; 40(18):9193-205. PubMed ID: 22772988
[TBL] [Abstract][Full Text] [Related]
16. The DNA damage-sensing NER repair factor XPC-RAD23B does not recognize bulky DNA lesions with a missing nucleotide opposite the lesion.
Feher KM; Kolbanovskiy A; Durandin A; Shim Y; Min JH; Lee YC; Shafirovich V; Mu H; Broyde S; Geacintov NE
DNA Repair (Amst); 2020 Dec; 96():102985. PubMed ID: 33035795
[TBL] [Abstract][Full Text] [Related]
17. Kinetics, structure, and mechanism of 8-Oxo-7,8-dihydro-2'-deoxyguanosine bypass by human DNA polymerase η.
Patra A; Nagy LD; Zhang Q; Su Y; Müller L; Guengerich FP; Egli M
J Biol Chem; 2014 Jun; 289(24):16867-82. PubMed ID: 24759104
[TBL] [Abstract][Full Text] [Related]
18. Translesion replication of benzo[a]pyrene and benzo[c]phenanthrene diol epoxide adducts of deoxyadenosine and deoxyguanosine by human DNA polymerase iota.
Frank EG; Sayer JM; Kroth H; Ohashi E; Ohmori H; Jerina DM; Woodgate R
Nucleic Acids Res; 2002 Dec; 30(23):5284-92. PubMed ID: 12466554
[TBL] [Abstract][Full Text] [Related]
19. Effect of Guanine Adduct Size, Shape, and Linker Type on the Conformation of Adducted DNA: A DFT and Molecular Dynamics Study.
Jeong YER; Kung RW; Bykowski J; Deak TK; Wetmore SD
J Phys Chem B; 2023 Oct; 127(42):9035-9049. PubMed ID: 37831812
[TBL] [Abstract][Full Text] [Related]
20. Computational insights into the mutagenicity of two tobacco-derived carcinogenic DNA lesions.
Wilson KA; Garden JL; Wetmore NT; Wetmore SD
Nucleic Acids Res; 2018 Dec; 46(22):11858-11868. PubMed ID: 30407571
[TBL] [Abstract][Full Text] [Related]
[Next] [New Search]