BIOMARKERS

Molecular Biopsy of Human Tumors

- a resource for Precision Medicine *

131 related articles for article (PubMed ID: 12385985)

  • 1. Theoretical analysis of alternative splice forms using computational methods.
    Boué S; Vingron M; Kriventseva E; Koch I
    Bioinformatics; 2002; 18 Suppl 2():S65-73. PubMed ID: 12385985
    [TBL] [Abstract][Full Text] [Related]  

  • 2. Gene structure prediction and alternative splicing analysis using genomically aligned ESTs.
    Kan Z; Rouchka EC; Gish WR; States DJ
    Genome Res; 2001 May; 11(5):889-900. PubMed ID: 11337482
    [TBL] [Abstract][Full Text] [Related]  

  • 3. Efficient prediction of alternative splice forms using protein domain homology.
    Hiller M; Backofen R; Heymann S; Busch A; Glaesser TM; Freytag JC
    In Silico Biol; 2004; 4(2):195-208. PubMed ID: 15107023
    [TBL] [Abstract][Full Text] [Related]  

  • 4. Alternatively Spliced Homologous Exons Have Ancient Origins and Are Highly Expressed at the Protein Level.
    Abascal F; Ezkurdia I; Rodriguez-Rivas J; Rodriguez JM; del Pozo A; Vázquez J; Valencia A; Tress ML
    PLoS Comput Biol; 2015 Jun; 11(6):e1004325. PubMed ID: 26061177
    [TBL] [Abstract][Full Text] [Related]  

  • 5. ASmodeler: gene modeling of alternative splicing from genomic alignment of mRNA, EST and protein sequences.
    Kim N; Shin S; Lee S
    Nucleic Acids Res; 2004 Jul; 32(Web Server issue):W181-6. PubMed ID: 15215376
    [TBL] [Abstract][Full Text] [Related]  

  • 6. Identification and evolutionary analysis of novel exons and alternative splicing events using cross-species EST-to-genome comparisons in human, mouse and rat.
    Chen FC; Chen CJ; Ho JY; Chuang TJ
    BMC Bioinformatics; 2006 Mar; 7():136. PubMed ID: 16536879
    [TBL] [Abstract][Full Text] [Related]  

  • 7. Integrating alternative splicing detection into gene prediction.
    Foissac S; Schiex T
    BMC Bioinformatics; 2005 Feb; 6():25. PubMed ID: 15705189
    [TBL] [Abstract][Full Text] [Related]  

  • 8. EASED: Extended Alternatively Spliced EST Database.
    Pospisil H; Herrmann A; Bortfeldt RH; Reich JG
    Nucleic Acids Res; 2004 Jan; 32(Database issue):D70-4. PubMed ID: 14681361
    [TBL] [Abstract][Full Text] [Related]  

  • 9. Exploring alternative transcript structure in the human genome using blocks and InterPro.
    Loraine AE; Helt GA; Cline MS; Siani-Rose MA
    J Bioinform Comput Biol; 2003 Jul; 1(2):289-306. PubMed ID: 15290774
    [TBL] [Abstract][Full Text] [Related]  

  • 10. Genome wide identification and classification of alternative splicing based on EST data.
    Gupta S; Zink D; Korn B; Vingron M; Haas SA
    Bioinformatics; 2004 Nov; 20(16):2579-85. PubMed ID: 15117759
    [TBL] [Abstract][Full Text] [Related]  

  • 11. Alternative splicing of mouse transcription factors affects their DNA-binding domain architecture and is tissue specific.
    Taneri B; Snyder B; Novoradovsky A; Gaasterland T
    Genome Biol; 2004; 5(10):R75. PubMed ID: 15461794
    [TBL] [Abstract][Full Text] [Related]  

  • 12. ASD: the Alternative Splicing Database.
    Thanaraj TA; Stamm S; Clark F; Riethoven JJ; Le Texier V; Muilu J
    Nucleic Acids Res; 2004 Jan; 32(Database issue):D64-9. PubMed ID: 14681360
    [TBL] [Abstract][Full Text] [Related]  

  • 13. Splice variants: a homology modeling approach.
    Furnham N; Ruffle S; Southan C
    Proteins; 2004 Feb; 54(3):596-608. PubMed ID: 14748006
    [TBL] [Abstract][Full Text] [Related]  

  • 14. How prevalent is functional alternative splicing in the human genome?
    Sorek R; Shamir R; Ast G
    Trends Genet; 2004 Feb; 20(2):68-71. PubMed ID: 14746986
    [TBL] [Abstract][Full Text] [Related]  

  • 15. In silico study of breast cancer associated gene 3 using LION Target Engine and other tools.
    León DA; Cànaves JM
    Biotechniques; 2003 Dec; 35(6):1222-6, 1228, 1230-1. PubMed ID: 14682057
    [TBL] [Abstract][Full Text] [Related]  

  • 16. Selecting for functional alternative splices in ESTs.
    Kan Z; States D; Gish W
    Genome Res; 2002 Dec; 12(12):1837-45. PubMed ID: 12466287
    [TBL] [Abstract][Full Text] [Related]  

  • 17. Alternative splicing of mutually exclusive exons--a review.
    Pohl M; Bortfeldt RH; Grützmann K; Schuster S
    Biosystems; 2013 Oct; 114(1):31-8. PubMed ID: 23850531
    [TBL] [Abstract][Full Text] [Related]  

  • 18. Protein-based analysis of alternative splicing in the human genome.
    Loraine AE; Helt GA; Cline MS; Siani-Rose MA
    Proc IEEE Comput Soc Bioinform Conf; 2002; 1():118-24. PubMed ID: 15838129
    [TBL] [Abstract][Full Text] [Related]  

  • 19. Alternative splicing detection workflow needs a careful combination of sample prep and bioinformatics analysis.
    Carrara M; Lum J; Cordero F; Beccuti M; Poidinger M; Donatelli S; Calogero RA; Zolezzi F
    BMC Bioinformatics; 2015; 16 Suppl 9(Suppl 9):S2. PubMed ID: 26050971
    [TBL] [Abstract][Full Text] [Related]  

  • 20. Genome-wide detection of tissue-specific alternative splicing in the human transcriptome.
    Xu Q; Modrek B; Lee C
    Nucleic Acids Res; 2002 Sep; 30(17):3754-66. PubMed ID: 12202761
    [TBL] [Abstract][Full Text] [Related]  

    [Next]    [New Search]
    of 7.