These tools will no longer be maintained as of December 31, 2024. Archived website can be found here. PubMed4Hh GitHub repository can be found here. Contact NLM Customer Service if you have questions.
111 related articles for article (PubMed ID: 12486529)
1. A DNA sequence evolution analysis generalized by simulation and the markov chain monte carlo method implicates strand slippage in a majority of insertions and deletions. Nishizawa M; Nishizawa K J Mol Evol; 2002 Dec; 55(6):706-17. PubMed ID: 12486529 [TBL] [Abstract][Full Text] [Related]
2. A profile-based deterministic sequential Monte Carlo algorithm for motif discovery. Liang KC; Wang X; Anastassiou D Bioinformatics; 2008 Jan; 24(1):46-55. PubMed ID: 18024972 [TBL] [Abstract][Full Text] [Related]
3. Indelign: a probabilistic framework for annotation of insertions and deletions in a multiple alignment. Kim J; Sinha S Bioinformatics; 2007 Feb; 23(3):289-97. PubMed ID: 17110370 [TBL] [Abstract][Full Text] [Related]
4. Meta-analysis of indels causing human genetic disease: mechanisms of mutagenesis and the role of local DNA sequence complexity. Chuzhanova NA; Anassis EJ; Ball EV; Krawczak M; Cooper DN Hum Mutat; 2003 Jan; 21(1):28-44. PubMed ID: 12497629 [TBL] [Abstract][Full Text] [Related]
5. Stochastic models of sequence evolution including insertion-deletion events. Miklós I; Novák A; Satija R; Lyngsø R; Hein J Stat Methods Med Res; 2009 Oct; 18(5):453-85. PubMed ID: 19221170 [TBL] [Abstract][Full Text] [Related]
6. SIMPROT: using an empirically determined indel distribution in simulations of protein evolution. Pang A; Smith AD; Nuin PA; Tillier ER BMC Bioinformatics; 2005 Sep; 6():236. PubMed ID: 16188037 [TBL] [Abstract][Full Text] [Related]
7. General continuous-time Markov model of sequence evolution via insertions/deletions: are alignment probabilities factorable? Ezawa K BMC Bioinformatics; 2016 Aug; 17():304. PubMed ID: 27638547 [TBL] [Abstract][Full Text] [Related]
8. A Bayesian approach to DNA sequence segmentation. Boys RJ; Henderson DA Biometrics; 2004 Sep; 60(3):573-81; discussion 581-8. PubMed ID: 15339274 [TBL] [Abstract][Full Text] [Related]
9. Joint Bayesian estimation of alignment and phylogeny. Redelings BD; Suchard MA Syst Biol; 2005 Jun; 54(3):401-18. PubMed ID: 16012107 [TBL] [Abstract][Full Text] [Related]
10. Indel evolution of mammalian introns and the utility of non-coding nuclear markers in eutherian phylogenetics. Matthee CA; Eick G; Willows-Munro S; Montgelard C; Pardini AT; Robinson TJ Mol Phylogenet Evol; 2007 Mar; 42(3):827-37. PubMed ID: 17101283 [TBL] [Abstract][Full Text] [Related]
11. DNA assembly with gaps (Dawg): simulating sequence evolution. Cartwright RA Bioinformatics; 2005 Nov; 21 Suppl 3():iii31-8. PubMed ID: 16306390 [TBL] [Abstract][Full Text] [Related]
12. Patterns and rates of indel evolution in processed pseudogenes from humans and murids. Ophir R; Graur D Gene; 1997 Dec; 205(1-2):191-202. PubMed ID: 9461394 [TBL] [Abstract][Full Text] [Related]
13. Gross genomic rearrangements involving deletions in the CFTR gene: characterization of six new events from a large cohort of hitherto unidentified cystic fibrosis chromosomes and meta-analysis of the underlying mechanisms. Férec C; Casals T; Chuzhanova N; Macek M; Bienvenu T; Holubova A; King C; McDevitt T; Castellani C; Farrell PM; Sheridan M; Pantaleo SJ; Loumi O; Messaoud T; Cuppens H; Torricelli F; Cutting GR; Williamson R; Ramos MJ; Pignatti PF; Raguénès O; Cooper DN; Audrézet MP; Chen JM Eur J Hum Genet; 2006 May; 14(5):567-76. PubMed ID: 16493442 [TBL] [Abstract][Full Text] [Related]
14. Unraveling the evolutionary radiation of the thoracican barnacles using molecular and morphological evidence: a comparison of several divergence time estimation approaches. Pérez-Losada M; Høeg JT; Crandall KA Syst Biol; 2004 Apr; 53(2):244-64. PubMed ID: 15205051 [TBL] [Abstract][Full Text] [Related]
16. Meta-analysis of gross insertions causing human genetic disease: novel mutational mechanisms and the role of replication slippage. Chen JM; Chuzhanova N; Stenson PD; Férec C; Cooper DN Hum Mutat; 2005 Feb; 25(2):207-21. PubMed ID: 15643617 [TBL] [Abstract][Full Text] [Related]
17. indel-Seq-Gen: a new protein family simulator incorporating domains, motifs, and indels. Strope CL; Scott SD; Moriyama EN Mol Biol Evol; 2007 Mar; 24(3):640-9. PubMed ID: 17158778 [TBL] [Abstract][Full Text] [Related]
18. Modeling nucleotide evolution at the mesoscale: the phylogeny of the neotropical pitvipers of the Porthidium group (viperidae: crotalinae). Castoe TA; Sasa MM; Parkinson CL Mol Phylogenet Evol; 2005 Dec; 37(3):881-98. PubMed ID: 16024260 [TBL] [Abstract][Full Text] [Related]
19. Silene tatarica microsatellites are frequently located in repetitive DNA. Tero N; Neumeier H; Gudavalli R; Schlötterer C J Evol Biol; 2006 Sep; 19(5):1612-9. PubMed ID: 16910990 [TBL] [Abstract][Full Text] [Related]
20. Evolutionary history of 4.5SH RNA. Gogolevskaya IK; Koval AP; Kramerov DA Mol Biol Evol; 2005 Jul; 22(7):1546-54. PubMed ID: 15814830 [TBL] [Abstract][Full Text] [Related] [Next] [New Search]